RNA–Protein interactions for RNA: ENST00000484551.1

C6orf136-210, Transcript of chromosome 6 open reading frame 136, humanhuman

TSL 3

Gene C6orf136, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf136-210ENST00000484551 SF3B1O75533 1304 aaKnown RBP eCLIP18.08■□□□□ 0.497e-12■■■■■ 77.5
C6orf136-210ENST00000484551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.383e-8■■■■■ 74.5
C6orf136-210ENST00000484551 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.111e-13■■■■■ 59.9
C6orf136-210ENST00000484551 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.342e-6■■■■■ 30.3
C6orf136-210ENST00000484551 EFTUD2Q15029 972 aaKnown RBP eCLIP15.26■□□□□ 0.038e-24■■■■■ 27.9
C6orf136-210ENST00000484551 U2AF2P26368 475 aaKnown RBP eCLIP18.12■□□□□ 0.493e-21■■■■□ 26.3
C6orf136-210ENST00000484551 PCBP1Q15365 356 aaKnown RBP eCLIP18.24■□□□□ 0.514e-7■■■■□ 25.4
C6orf136-210ENST00000484551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■■□ 22.5
C6orf136-210ENST00000484551 HNRNPKP61978 463 aaKnown RBP eCLIP16.64■□□□□ 0.251e-8■■■□□ 17
C6orf136-210ENST00000484551 PCBP2Q15366 365 aaKnown RBP eCLIP15.16■□□□□ 0.027e-9■■■□□ 16.5
C6orf136-210ENST00000484551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.2■□□□□ 0.025e-7■■■□□ 16.3
C6orf136-210ENST00000484551 DDX3XO00571 662 aaKnown RBP eCLIP16.54■□□□□ 0.249e-8■■□□□ 12.7
C6orf136-210ENST00000484551 NCBP2P52298 156 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■□□□ 12.6
C6orf136-210ENST00000484551 PUM1Q14671 1186 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■■□□□ 11.8
C6orf136-210ENST00000484551 SF3B4Q15427 424 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■□□□□ 11.1
C6orf136-210ENST00000484551 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.66□□□□□ -0.065e-10■□□□□ 9.8
C6orf136-210ENST00000484551 ILF3Q12906 894 aaKnown RBP eCLIP16.38■□□□□ 0.213e-10■□□□□ 8.1
Retrieved 17 of 17 RNA–protein pairs in 5 ms