RNA–Protein interactions for RNA: ENST00000484312.1

ACTL6A-209, Transcript of actin like 6A, humanhuman

TSL 3

Gene ACTL6A, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-209ENST00000484312 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
ACTL6A-209ENST00000484312 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
ACTL6A-209ENST00000484312 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
ACTL6A-209ENST00000484312 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
ACTL6A-209ENST00000484312 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
ACTL6A-209ENST00000484312 FOXD1Q16676 465 aa17.37■□□□□ 0.37
ACTL6A-209ENST00000484312 ADRA2BP18089 450 aa17.06■□□□□ 0.32
ACTL6A-209ENST00000484312 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
ACTL6A-209ENST00000484312 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
ACTL6A-209ENST00000484312 KCNA4P22459 653 aa16.19■□□□□ 0.18
ACTL6A-209ENST00000484312 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
ACTL6A-209ENST00000484312 MSH5O43196 834 aa15.98■□□□□ 0.15
ACTL6A-209ENST00000484312 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ACTL6A-209ENST00000484312 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
ACTL6A-209ENST00000484312 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
ACTL6A-209ENST00000484312 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
ACTL6A-209ENST00000484312 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
ACTL6A-209ENST00000484312 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
ACTL6A-209ENST00000484312 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
ACTL6A-209ENST00000484312 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
ACTL6A-209ENST00000484312 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
ACTL6A-209ENST00000484312 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
ACTL6A-209ENST00000484312 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
ACTL6A-209ENST00000484312 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
ACTL6A-209ENST00000484312 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
ACTL6A-209ENST00000484312 ZBTB22O15209 634 aa14.82□□□□□ -0.04
ACTL6A-209ENST00000484312 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
ACTL6A-209ENST00000484312 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
ACTL6A-209ENST00000484312 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
ACTL6A-209ENST00000484312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
ACTL6A-209ENST00000484312 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
ACTL6A-209ENST00000484312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
ACTL6A-209ENST00000484312 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
ACTL6A-209ENST00000484312 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
ACTL6A-209ENST00000484312 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
ACTL6A-209ENST00000484312 APLP2Q06481 763 aa14.02□□□□□ -0.17
ACTL6A-209ENST00000484312 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
ACTL6A-209ENST00000484312 FKBP8Q14318 412 aa13.76□□□□□ -0.21
ACTL6A-209ENST00000484312 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
ACTL6A-209ENST00000484312 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
ACTL6A-209ENST00000484312 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
ACTL6A-209ENST00000484312 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
ACTL6A-209ENST00000484312 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
ACTL6A-209ENST00000484312 CAPN15O75808 1086 aa13.54□□□□□ -0.24
ACTL6A-209ENST00000484312 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
ACTL6A-209ENST00000484312 FBLN2P98095 1184 aa13.48□□□□□ -0.25
ACTL6A-209ENST00000484312 POLA2Q14181 598 aa13.42□□□□□ -0.26
ACTL6A-209ENST00000484312 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
ACTL6A-209ENST00000484312 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
ACTL6A-209ENST00000484312 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
ACTL6A-209ENST00000484312 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
ACTL6A-209ENST00000484312 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
ACTL6A-209ENST00000484312 ABCB7O75027 752 aa13.26□□□□□ -0.29
ACTL6A-209ENST00000484312 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
ACTL6A-209ENST00000484312 DSG3P32926 999 aa13.13□□□□□ -0.31
ACTL6A-209ENST00000484312 PROM2Q8N271 834 aa13.1□□□□□ -0.31
ACTL6A-209ENST00000484312 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
ACTL6A-209ENST00000484312 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
ACTL6A-209ENST00000484312 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
ACTL6A-209ENST00000484312 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
ACTL6A-209ENST00000484312 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
ACTL6A-209ENST00000484312 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
ACTL6A-209ENST00000484312 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
ACTL6A-209ENST00000484312 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
ACTL6A-209ENST00000484312 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
ACTL6A-209ENST00000484312 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
ACTL6A-209ENST00000484312 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
ACTL6A-209ENST00000484312 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
ACTL6A-209ENST00000484312 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
ACTL6A-209ENST00000484312 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
ACTL6A-209ENST00000484312 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
ACTL6A-209ENST00000484312 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
ACTL6A-209ENST00000484312 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
ACTL6A-209ENST00000484312 MIER1Q8N108 512 aa12.64□□□□□ -0.39
ACTL6A-209ENST00000484312 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
ACTL6A-209ENST00000484312 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
ACTL6A-209ENST00000484312 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
ACTL6A-209ENST00000484312 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
ACTL6A-209ENST00000484312 PKD2Q13563 968 aa12.49□□□□□ -0.41
ACTL6A-209ENST00000484312 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
ACTL6A-209ENST00000484312 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
ACTL6A-209ENST00000484312 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
ACTL6A-209ENST00000484312 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
ACTL6A-209ENST00000484312 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
ACTL6A-209ENST00000484312 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
ACTL6A-209ENST00000484312 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
ACTL6A-209ENST00000484312 GSE1Q14687 1217 aa12.3□□□□□ -0.44
ACTL6A-209ENST00000484312 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
ACTL6A-209ENST00000484312 RGL2O15211 777 aa12.22□□□□□ -0.45
ACTL6A-209ENST00000484312 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
ACTL6A-209ENST00000484312 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
ACTL6A-209ENST00000484312 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
ACTL6A-209ENST00000484312 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
ACTL6A-209ENST00000484312 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
ACTL6A-209ENST00000484312 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
ACTL6A-209ENST00000484312 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
ACTL6A-209ENST00000484312 NUBP1P53384 320 aa12.18□□□□□ -0.46
ACTL6A-209ENST00000484312 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
ACTL6A-209ENST00000484312 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
ACTL6A-209ENST00000484312 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms