RNA–Protein interactions for RNA: ENST00000483600.1

AFF3-214, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-214ENST00000483600 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
AFF3-214ENST00000483600 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
AFF3-214ENST00000483600 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
AFF3-214ENST00000483600 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
AFF3-214ENST00000483600 FOXD1Q16676 465 aa20.89■□□□□ 0.93
AFF3-214ENST00000483600 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
AFF3-214ENST00000483600 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
AFF3-214ENST00000483600 ADRA2BP18089 450 aa19.75■□□□□ 0.75
AFF3-214ENST00000483600 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
AFF3-214ENST00000483600 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
AFF3-214ENST00000483600 MSH5O43196 834 aa19.41■□□□□ 0.7
AFF3-214ENST00000483600 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
AFF3-214ENST00000483600 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
AFF3-214ENST00000483600 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
AFF3-214ENST00000483600 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
AFF3-214ENST00000483600 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
AFF3-214ENST00000483600 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
AFF3-214ENST00000483600 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
AFF3-214ENST00000483600 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
AFF3-214ENST00000483600 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
AFF3-214ENST00000483600 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
AFF3-214ENST00000483600 KCNA4P22459 653 aa17.13■□□□□ 0.33
AFF3-214ENST00000483600 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
AFF3-214ENST00000483600 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
AFF3-214ENST00000483600 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
AFF3-214ENST00000483600 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
AFF3-214ENST00000483600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
AFF3-214ENST00000483600 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
AFF3-214ENST00000483600 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
AFF3-214ENST00000483600 ZCCHC6Q5VYS8 1495 aaKnown RBP16.31■□□□□ 0.2
AFF3-214ENST00000483600 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
AFF3-214ENST00000483600 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
AFF3-214ENST00000483600 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
AFF3-214ENST00000483600 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
AFF3-214ENST00000483600 ABCC9O60706 1549 aa16.15■□□□□ 0.18
AFF3-214ENST00000483600 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
AFF3-214ENST00000483600 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
AFF3-214ENST00000483600 NACADO15069 1562 aa15.95■□□□□ 0.14
AFF3-214ENST00000483600 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
AFF3-214ENST00000483600 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
AFF3-214ENST00000483600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
AFF3-214ENST00000483600 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
AFF3-214ENST00000483600 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
AFF3-214ENST00000483600 CAPN15O75808 1086 aa15.84■□□□□ 0.13
AFF3-214ENST00000483600 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
AFF3-214ENST00000483600 APLP2Q06481 763 aa15.79■□□□□ 0.12
AFF3-214ENST00000483600 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
AFF3-214ENST00000483600 ZBTB22O15209 634 aa15.77■□□□□ 0.12
AFF3-214ENST00000483600 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
AFF3-214ENST00000483600 DSG3P32926 999 aa15.66■□□□□ 0.1
AFF3-214ENST00000483600 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
AFF3-214ENST00000483600 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
AFF3-214ENST00000483600 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
AFF3-214ENST00000483600 ABCB7O75027 752 aa15.51■□□□□ 0.07
AFF3-214ENST00000483600 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
AFF3-214ENST00000483600 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
AFF3-214ENST00000483600 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
AFF3-214ENST00000483600 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
AFF3-214ENST00000483600 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
AFF3-214ENST00000483600 POLA2Q14181 598 aa15.31■□□□□ 0.04
AFF3-214ENST00000483600 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
AFF3-214ENST00000483600 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
AFF3-214ENST00000483600 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
AFF3-214ENST00000483600 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
AFF3-214ENST00000483600 SUPT5HO00267 1087 aaKnown RBP15.05■□□□□ -0
AFF3-214ENST00000483600 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
AFF3-214ENST00000483600 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
AFF3-214ENST00000483600 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
AFF3-214ENST00000483600 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
AFF3-214ENST00000483600 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
AFF3-214ENST00000483600 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
AFF3-214ENST00000483600 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
AFF3-214ENST00000483600 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
AFF3-214ENST00000483600 WIZO95785 1651 aa14.82□□□□□ -0.04
AFF3-214ENST00000483600 FBLN2P98095 1184 aa14.82□□□□□ -0.04
AFF3-214ENST00000483600 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
AFF3-214ENST00000483600 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
AFF3-214ENST00000483600 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.05
AFF3-214ENST00000483600 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
AFF3-214ENST00000483600 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
AFF3-214ENST00000483600 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
AFF3-214ENST00000483600 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
AFF3-214ENST00000483600 AKT1S1Q96B36 256 aa14.66□□□□□ -0.06
AFF3-214ENST00000483600 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
AFF3-214ENST00000483600 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
AFF3-214ENST00000483600 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
AFF3-214ENST00000483600 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
AFF3-214ENST00000483600 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
AFF3-214ENST00000483600 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
AFF3-214ENST00000483600 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
AFF3-214ENST00000483600 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
AFF3-214ENST00000483600 POTEHQ6S545 545 aa14.46□□□□□ -0.09
AFF3-214ENST00000483600 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
AFF3-214ENST00000483600 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
AFF3-214ENST00000483600 CFTRP13569 1480 aa14.33□□□□□ -0.12
AFF3-214ENST00000483600 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
AFF3-214ENST00000483600 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
AFF3-214ENST00000483600 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
AFF3-214ENST00000483600 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
AFF3-214ENST00000483600 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms