RNA–Protein interactions for RNA: ENST00000483285.1

NUP98-211, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-211ENST00000483285 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
NUP98-211ENST00000483285 ABCC9O60706 1549 aa24.62■■□□□ 1.53
NUP98-211ENST00000483285 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
NUP98-211ENST00000483285 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
NUP98-211ENST00000483285 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
NUP98-211ENST00000483285 NACADO15069 1562 aa23.18■■□□□ 1.3
NUP98-211ENST00000483285 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
NUP98-211ENST00000483285 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
NUP98-211ENST00000483285 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
NUP98-211ENST00000483285 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
NUP98-211ENST00000483285 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
NUP98-211ENST00000483285 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
NUP98-211ENST00000483285 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
NUP98-211ENST00000483285 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
NUP98-211ENST00000483285 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
NUP98-211ENST00000483285 CC2D2AQ9P2K1 1620 aa22.19■■□□□ 1.14
NUP98-211ENST00000483285 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
NUP98-211ENST00000483285 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
NUP98-211ENST00000483285 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
NUP98-211ENST00000483285 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
NUP98-211ENST00000483285 SMARCA4P51532 1647 aa21.31■■□□□ 1
NUP98-211ENST00000483285 ERCC6Q03468 1493 aa21.31■■□□□ 1
NUP98-211ENST00000483285 SMARCA2P51531 1590 aa21.29■■□□□ 1
NUP98-211ENST00000483285 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
NUP98-211ENST00000483285 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
NUP98-211ENST00000483285 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
NUP98-211ENST00000483285 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
NUP98-211ENST00000483285 CUX2O14529 1486 aa21.17■□□□□ 0.98
NUP98-211ENST00000483285 NESP48681 1621 aa21.1■□□□□ 0.97
NUP98-211ENST00000483285 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
NUP98-211ENST00000483285 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
NUP98-211ENST00000483285 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
NUP98-211ENST00000483285 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
NUP98-211ENST00000483285 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
NUP98-211ENST00000483285 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
NUP98-211ENST00000483285 WIZO95785 1651 aa20.81■□□□□ 0.92
NUP98-211ENST00000483285 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
NUP98-211ENST00000483285 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
NUP98-211ENST00000483285 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
NUP98-211ENST00000483285 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
NUP98-211ENST00000483285 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
NUP98-211ENST00000483285 WDR62O43379 1518 aa20.56■□□□□ 0.88
NUP98-211ENST00000483285 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
NUP98-211ENST00000483285 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
NUP98-211ENST00000483285 CFTRP13569 1480 aa20.49■□□□□ 0.87
NUP98-211ENST00000483285 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
NUP98-211ENST00000483285 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
NUP98-211ENST00000483285 PRDM2Q13029 1718 aa20.31■□□□□ 0.84
NUP98-211ENST00000483285 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
NUP98-211ENST00000483285 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
NUP98-211ENST00000483285 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
NUP98-211ENST00000483285 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
NUP98-211ENST00000483285 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
NUP98-211ENST00000483285 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
NUP98-211ENST00000483285 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
NUP98-211ENST00000483285 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
NUP98-211ENST00000483285 FBLN2P98095 1184 aa19.97■□□□□ 0.79
NUP98-211ENST00000483285 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
NUP98-211ENST00000483285 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
NUP98-211ENST00000483285 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
NUP98-211ENST00000483285 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.791e-6■■■■■ 33.5
NUP98-211ENST00000483285 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
NUP98-211ENST00000483285 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
NUP98-211ENST00000483285 CHD1O14646 1710 aa19.89■□□□□ 0.77
NUP98-211ENST00000483285 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
NUP98-211ENST00000483285 SOGA1O94964 1423 aa19.89■□□□□ 0.77
NUP98-211ENST00000483285 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
NUP98-211ENST00000483285 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
NUP98-211ENST00000483285 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
NUP98-211ENST00000483285 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
NUP98-211ENST00000483285 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
NUP98-211ENST00000483285 CUX1P39880 1505 aa19.77■□□□□ 0.76
NUP98-211ENST00000483285 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
NUP98-211ENST00000483285 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
NUP98-211ENST00000483285 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
NUP98-211ENST00000483285 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
NUP98-211ENST00000483285 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
NUP98-211ENST00000483285 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
NUP98-211ENST00000483285 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
NUP98-211ENST00000483285 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
NUP98-211ENST00000483285 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
NUP98-211ENST00000483285 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
NUP98-211ENST00000483285 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
NUP98-211ENST00000483285 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
NUP98-211ENST00000483285 CLASP1Q7Z460 1538 aa19.6■□□□□ 0.73
NUP98-211ENST00000483285 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
NUP98-211ENST00000483285 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
NUP98-211ENST00000483285 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.72
NUP98-211ENST00000483285 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
NUP98-211ENST00000483285 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
NUP98-211ENST00000483285 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
NUP98-211ENST00000483285 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
NUP98-211ENST00000483285 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
NUP98-211ENST00000483285 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
NUP98-211ENST00000483285 NUP160Q12769 1436 aa19.33■□□□□ 0.68
NUP98-211ENST00000483285 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
NUP98-211ENST00000483285 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
NUP98-211ENST00000483285 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
NUP98-211ENST00000483285 JPH4Q96JJ6 628 aa19.22■□□□□ 0.67
NUP98-211ENST00000483285 PRG4Q92954 1404 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms