RNA–Protein interactions for RNA: ENST00000482389.1

SEM1-209, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 2,773 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-209ENST00000482389 POTEDQ86YR6 584 aa10.87□□□□□ -0.67
SEM1-209ENST00000482389 AEBP2Q6ZN18 517 aaPredicted RBP9.62□□□□□ -0.87
SEM1-209ENST00000482389 CHIC1Q5VXU3 224 aa9.49□□□□□ -0.89
SEM1-209ENST00000482389 SENP3Q9H4L4 574 aaPredicted RBP8.84□□□□□ -0.99
SEM1-209ENST00000482389 MSH5O43196 834 aa8.79□□□□□ -1
SEM1-209ENST00000482389 PHF23Q9BUL5 403 aaPredicted RBP8.41□□□□□ -1.06
SEM1-209ENST00000482389 POTEHQ6S545 545 aa8.25□□□□□ -1.09
SEM1-209ENST00000482389 CACNB1Q02641 598 aaPredicted RBP8.12□□□□□ -1.11
SEM1-209ENST00000482389 FOXD1Q16676 465 aa7.87□□□□□ -1.15
SEM1-209ENST00000482389 PLPPR3Q6T4P5 718 aa7.76□□□□□ -1.17
SEM1-209ENST00000482389 PPP6R1Q9UPN7 881 aa7.38□□□□□ -1.23
SEM1-209ENST00000482389 ADRA2BP18089 450 aa7.38□□□□□ -1.23
SEM1-209ENST00000482389 PLSCR2Q9NRY7 297 aa7.16□□□□□ -1.26
SEM1-209ENST00000482389 PIAS4Q8N2W9 510 aaPredicted RBP7.12□□□□□ -1.27
SEM1-209ENST00000482389 C1QBPQ07021 282 aaKnown RBP7.12□□□□□ -1.27
SEM1-209ENST00000482389 PCDH10Q9P2E7 1040 aa7.11□□□□□ -1.27
SEM1-209ENST00000482389 SP7Q8TDD2 431 aaPredicted RBP7.04□□□□□ -1.28
SEM1-209ENST00000482389 RNF39Q9H2S5 420 aa6.95□□□□□ -1.3
SEM1-209ENST00000482389 KCNA4P22459 653 aa6.93□□□□□ -1.3
SEM1-209ENST00000482389 PPP4R3CPQ6ZMV5 832 aa6.88□□□□□ -1.31
SEM1-209ENST00000482389 DNAJC5BQ9UF47 199 aa6.74□□□□□ -1.33
SEM1-209ENST00000482389 NCBP3Q53F19 620 aaKnown RBP6.69□□□□□ -1.34
SEM1-209ENST00000482389 MAPK8IP2Q13387 824 aaPredicted RBP6.66□□□□□ -1.34
SEM1-209ENST00000482389 SCAF1Q9H7N4 1312 aaKnown RBP6.66□□□□□ -1.34
SEM1-209ENST00000482389 NPM3O75607 178 aaKnown RBP6.66□□□□□ -1.34
SEM1-209ENST00000482389 DMRT2Q9Y5R5 561 aa6.65□□□□□ -1.34
SEM1-209ENST00000482389 CNKSR2Q8WXI2 1034 aa6.63□□□□□ -1.35
SEM1-209ENST00000482389 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
SEM1-209ENST00000482389 SLC4A1APQ9BWU0 796 aaKnown RBP6.59□□□□□ -1.35
SEM1-209ENST00000482389 LHX8Q68G74 356 aa6.53□□□□□ -1.36
SEM1-209ENST00000482389 CSRNP3Q8WYN3 585 aa6.46□□□□□ -1.37
SEM1-209ENST00000482389 RNF216Q9NWF9 866 aaPredicted RBP6.46□□□□□ -1.38
SEM1-209ENST00000482389 ZBTB22O15209 634 aa6.4□□□□□ -1.39
SEM1-209ENST00000482389 HOXD11P31277 338 aaPredicted RBP6.4□□□□□ -1.39
SEM1-209ENST00000482389 FOXD4L1Q9NU39 408 aa6.29□□□□□ -1.4
SEM1-209ENST00000482389 SLC4A2P04920 1241 aa6.26□□□□□ -1.41
SEM1-209ENST00000482389 DCAF8L1A6NGE4 600 aa6.22□□□□□ -1.41
SEM1-209ENST00000482389 RBM42Q9BTD8 480 aaKnown RBP6.18□□□□□ -1.42
SEM1-209ENST00000482389 CHRDL2Q6WN34 429 aa6.16□□□□□ -1.42
SEM1-209ENST00000482389 MYCNP04198 464 aaPredicted RBP6.12□□□□□ -1.43
SEM1-209ENST00000482389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.11□□□□□ -1.436e-10■■□□□ 14
SEM1-209ENST00000482389 POTEMA6NI47 508 aa6.06□□□□□ -1.44
SEM1-209ENST00000482389 U3KPZ7 1027 aaPredicted RBP6.05□□□□□ -1.44
SEM1-209ENST00000482389 CLCN6P51797 869 aa6.04□□□□□ -1.44
SEM1-209ENST00000482389 ATXN8OSP0DMR3 200 aa6.01□□□□□ -1.45
SEM1-209ENST00000482389 ATF5Q9Y2D1 282 aaPredicted RBP6.01□□□□□ -1.45
SEM1-209ENST00000482389 POTEGQ6S5H5 508 aa5.99□□□□□ -1.45
SEM1-209ENST00000482389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.95□□□□□ -1.46
SEM1-209ENST00000482389 HNRNPUL2Q1KMD3 747 aaKnown RBP5.95□□□□□ -1.46
SEM1-209ENST00000482389 SAMD1Q6SPF0 538 aaPredicted RBP5.95□□□□□ -1.46
SEM1-209ENST00000482389 HAX1O00165 279 aa5.88□□□□□ -1.47
SEM1-209ENST00000482389 SPINK5Q9NQ38 1064 aaPredicted RBP5.86□□□□□ -1.47
SEM1-209ENST00000482389 ZNF219Q9P2Y4 722 aaPredicted RBP5.84□□□□□ -1.47
SEM1-209ENST00000482389 APLP2Q06481 763 aa5.83□□□□□ -1.48
SEM1-209ENST00000482389 FKBP8Q14318 412 aa5.83□□□□□ -1.48
SEM1-209ENST00000482389 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
SEM1-209ENST00000482389 CAPN15O75808 1086 aa5.79□□□□□ -1.48
SEM1-209ENST00000482389 DSG3P32926 999 aa5.78□□□□□ -1.48
SEM1-209ENST00000482389 POLA2Q14181 598 aa5.75□□□□□ -1.49
SEM1-209ENST00000482389 MKRN4PQ13434 485 aaPredicted RBP5.73□□□□□ -1.49
SEM1-209ENST00000482389 ABCB7O75027 752 aa5.72□□□□□ -1.49
SEM1-209ENST00000482389 FBLN2P98095 1184 aa5.67□□□□□ -1.5
SEM1-209ENST00000482389 SPDYE4A6NLX3 237 aa5.66□□□□□ -1.5
SEM1-209ENST00000482389 ZBTB12Q9Y330 459 aaPredicted RBP5.6□□□□□ -1.51
SEM1-209ENST00000482389 RTN4Q9NQC3 1192 aaKnown RBP5.59□□□□□ -1.51
SEM1-209ENST00000482389 MAMSTRQ6ZN01 415 aa5.57□□□□□ -1.52
SEM1-209ENST00000482389 PIP4P2Q8N4L2 257 aa5.57□□□□□ -1.52
SEM1-209ENST00000482389 OSCARQ8IYS5 282 aa5.56□□□□□ -1.52
SEM1-209ENST00000482389 PROM2Q8N271 834 aa5.56□□□□□ -1.52
SEM1-209ENST00000482389 GABBR2O75899 941 aa5.54□□□□□ -1.52
SEM1-209ENST00000482389 FXR2P51116 673 aaKnown RBP eCLIP5.54□□□□□ -1.52
SEM1-209ENST00000482389 AMER1Q5JTC6 1135 aaPredicted RBP5.53□□□□□ -1.52
SEM1-209ENST00000482389 CDAN1Q8IWY9 1227 aa5.53□□□□□ -1.52
SEM1-209ENST00000482389 AKT1S1Q96B36 256 aa5.52□□□□□ -1.53
SEM1-209ENST00000482389 ZNF692Q9BU19 519 aaPredicted RBP5.52□□□□□ -1.53
SEM1-209ENST00000482389 FBXO3Q9UK99 471 aa5.52□□□□□ -1.53
SEM1-209ENST00000482389 SPDYE2BA6NHP3 402 aa5.49□□□□□ -1.53
SEM1-209ENST00000482389 SPDYE6P0CI01 402 aa5.49□□□□□ -1.53
SEM1-209ENST00000482389 SPDYE2Q495Y8 402 aa5.49□□□□□ -1.53
SEM1-209ENST00000482389 VASPP50552 380 aaPredicted RBP5.48□□□□□ -1.53
SEM1-209ENST00000482389 MMRN1Q13201 1228 aa5.48□□□□□ -1.53
SEM1-209ENST00000482389 SSUH2Q9Y2M2 353 aa5.48□□□□□ -1.53
SEM1-209ENST00000482389 PABPN1Q86U42 306 aaKnown RBP eCLIP5.46□□□□□ -1.54
SEM1-209ENST00000482389 C19orf67A6NJJ6 358 aa5.44□□□□□ -1.54
SEM1-209ENST00000482389 IFNLR1Q8IU57 520 aaPredicted RBP5.44□□□□□ -1.54
SEM1-209ENST00000482389 XP32Q5T750 250 aa5.42□□□□□ -1.54
SEM1-209ENST00000482389 OTUD5Q96G74 571 aa5.38□□□□□ -1.55
SEM1-209ENST00000482389 STAG3Q9UJ98 1225 aa5.37□□□□□ -1.55
SEM1-209ENST00000482389 PLCD3Q8N3E9 789 aa5.35□□□□□ -1.55
SEM1-209ENST00000482389 MIER1Q8N108 512 aa5.35□□□□□ -1.55
SEM1-209ENST00000482389 KLHL34Q8N239 644 aa5.35□□□□□ -1.55
SEM1-209ENST00000482389 PKD2Q13563 968 aa5.32□□□□□ -1.56
SEM1-209ENST00000482389 SPNS2Q8IVW8 549 aa5.31□□□□□ -1.56
SEM1-209ENST00000482389 SPOCK2Q92563 424 aa5.31□□□□□ -1.56
SEM1-209ENST00000482389 CLEC11AQ9Y240 323 aa5.31□□□□□ -1.56
SEM1-209ENST00000482389 REM2Q8IYK8 340 aaPredicted RBP5.3□□□□□ -1.56
SEM1-209ENST00000482389 SPDYE1Q8NFV5 336 aaPredicted RBP5.29□□□□□ -1.56
SEM1-209ENST00000482389 SLC24A1O60721 1099 aa5.27□□□□□ -1.57
SEM1-209ENST00000482389 PLEKHG5O94827 1062 aa5.26□□□□□ -1.57
SEM1-209ENST00000482389 DCAF8L2P0C7V8 631 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms