RNA–Protein interactions for RNA: ENST00000481909.1

C10orf88-204, Transcript of chromosome 10 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C10orf88, Length 2,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf88-204ENST00000481909 NISCHQ9Y2I1 1504 aa31.97■■■□□ 2.71
C10orf88-204ENST00000481909 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
C10orf88-204ENST00000481909 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
C10orf88-204ENST00000481909 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
C10orf88-204ENST00000481909 ABCC9O60706 1549 aa26.45■■□□□ 1.82
C10orf88-204ENST00000481909 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.81
C10orf88-204ENST00000481909 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
C10orf88-204ENST00000481909 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
C10orf88-204ENST00000481909 NACADO15069 1562 aa25.97■■□□□ 1.75
C10orf88-204ENST00000481909 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
C10orf88-204ENST00000481909 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
C10orf88-204ENST00000481909 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
C10orf88-204ENST00000481909 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
C10orf88-204ENST00000481909 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
C10orf88-204ENST00000481909 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
C10orf88-204ENST00000481909 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
C10orf88-204ENST00000481909 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
C10orf88-204ENST00000481909 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
C10orf88-204ENST00000481909 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
C10orf88-204ENST00000481909 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
C10orf88-204ENST00000481909 WIZO95785 1651 aa24.53■■□□□ 1.52
C10orf88-204ENST00000481909 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
C10orf88-204ENST00000481909 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
C10orf88-204ENST00000481909 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
C10orf88-204ENST00000481909 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
C10orf88-204ENST00000481909 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
C10orf88-204ENST00000481909 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
C10orf88-204ENST00000481909 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
C10orf88-204ENST00000481909 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
C10orf88-204ENST00000481909 NCAPD3P42695 1498 aa23.96■■□□□ 1.43
C10orf88-204ENST00000481909 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
C10orf88-204ENST00000481909 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
C10orf88-204ENST00000481909 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
C10orf88-204ENST00000481909 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
C10orf88-204ENST00000481909 CFTRP13569 1480 aa23.43■■□□□ 1.34
C10orf88-204ENST00000481909 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
C10orf88-204ENST00000481909 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
C10orf88-204ENST00000481909 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
C10orf88-204ENST00000481909 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
C10orf88-204ENST00000481909 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
C10orf88-204ENST00000481909 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
C10orf88-204ENST00000481909 NESP48681 1621 aa23.2■■□□□ 1.3
C10orf88-204ENST00000481909 LAMC3Q9Y6N6 1575 aa23.17■■□□□ 1.3
C10orf88-204ENST00000481909 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
C10orf88-204ENST00000481909 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
C10orf88-204ENST00000481909 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
C10orf88-204ENST00000481909 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
C10orf88-204ENST00000481909 CUX1P39880 1505 aa23.11■■□□□ 1.29
C10orf88-204ENST00000481909 SOGA1O94964 1423 aa23.06■■□□□ 1.28
C10orf88-204ENST00000481909 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
C10orf88-204ENST00000481909 EEA1Q15075 1411 aa23■■□□□ 1.27
C10orf88-204ENST00000481909 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
C10orf88-204ENST00000481909 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
C10orf88-204ENST00000481909 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
C10orf88-204ENST00000481909 KIF21AQ7Z4S6 1674 aa22.92■■□□□ 1.26
C10orf88-204ENST00000481909 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
C10orf88-204ENST00000481909 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
C10orf88-204ENST00000481909 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
C10orf88-204ENST00000481909 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
C10orf88-204ENST00000481909 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
C10orf88-204ENST00000481909 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
C10orf88-204ENST00000481909 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
C10orf88-204ENST00000481909 CUX2O14529 1486 aa22.73■■□□□ 1.23
C10orf88-204ENST00000481909 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
C10orf88-204ENST00000481909 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
C10orf88-204ENST00000481909 KIF21BO75037 1637 aa22.7■■□□□ 1.23
C10orf88-204ENST00000481909 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
C10orf88-204ENST00000481909 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
C10orf88-204ENST00000481909 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
C10orf88-204ENST00000481909 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
C10orf88-204ENST00000481909 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
C10orf88-204ENST00000481909 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
C10orf88-204ENST00000481909 PRXQ9BXM0 1461 aa22.58■■□□□ 1.21
C10orf88-204ENST00000481909 WDR62O43379 1518 aa22.58■■□□□ 1.2
C10orf88-204ENST00000481909 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
C10orf88-204ENST00000481909 IGF1RP08069 1367 aa22.55■■□□□ 1.2
C10orf88-204ENST00000481909 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
C10orf88-204ENST00000481909 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
C10orf88-204ENST00000481909 HRCP23327 699 aa22.52■■□□□ 1.2
C10orf88-204ENST00000481909 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
C10orf88-204ENST00000481909 CEP162Q5TB80 1403 aa22.51■■□□□ 1.19
C10orf88-204ENST00000481909 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
C10orf88-204ENST00000481909 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
C10orf88-204ENST00000481909 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
C10orf88-204ENST00000481909 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
C10orf88-204ENST00000481909 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
C10orf88-204ENST00000481909 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
C10orf88-204ENST00000481909 CUL7Q14999 1698 aa22.39■■□□□ 1.18
C10orf88-204ENST00000481909 CLIP1P30622 1438 aa22.35■■□□□ 1.17
C10orf88-204ENST00000481909 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.17
C10orf88-204ENST00000481909 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
C10orf88-204ENST00000481909 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
C10orf88-204ENST00000481909 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
C10orf88-204ENST00000481909 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
C10orf88-204ENST00000481909 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
C10orf88-204ENST00000481909 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
C10orf88-204ENST00000481909 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
C10orf88-204ENST00000481909 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
C10orf88-204ENST00000481909 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.13
C10orf88-204ENST00000481909 VPS8Q8N3P4 1428 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms