RNA–Protein interactions for RNA: ENST00000481668.5

CHDH-203, Transcript of choline dehydrogenase, humanhuman

TSL 2

Gene CHDH, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-203ENST00000481668 NISCHQ9Y2I1 1504 aa48.88■■■■■ 5.42
CHDH-203ENST00000481668 CCDC180Q9P1Z9 1646 aa43.71■■■■■ 4.59
CHDH-203ENST00000481668 ABCC9O60706 1549 aa42.97■■■■■ 4.47
CHDH-203ENST00000481668 RB1CC1Q8TDY2 1594 aa41.26■■■■■ 4.2
CHDH-203ENST00000481668 NACADO15069 1562 aa41.13■■■■■ 4.18
CHDH-203ENST00000481668 DCAF8L2P0C7V8 631 aa40.89■■■■■ 4.14
CHDH-203ENST00000481668 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
CHDH-203ENST00000481668 ZCCHC6Q5VYS8 1495 aaKnown RBP40.64■■■■■ 4.1
CHDH-203ENST00000481668 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
CHDH-203ENST00000481668 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
CHDH-203ENST00000481668 PABPN1Q86U42 306 aaKnown RBP eCLIP40.04■■■■■ 4
CHDH-203ENST00000481668 BICRAQ9NZM4 1560 aa39.99■■■■□ 3.99
CHDH-203ENST00000481668 SCRIBQ14160 1630 aa39.76■■■■□ 3.96
CHDH-203ENST00000481668 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
CHDH-203ENST00000481668 SHROOM4Q9ULL8 1493 aa39.59■■■■□ 3.93
CHDH-203ENST00000481668 EIF4G1Q04637 1599 aaKnown RBP38.97■■■■□ 3.83
CHDH-203ENST00000481668 CC2D2AQ9P2K1 1620 aa38.91■■■■□ 3.82
CHDH-203ENST00000481668 CECR2Q9BXF3 1484 aa38.66■■■■□ 3.78
CHDH-203ENST00000481668 SMARCA4P51532 1647 aa38.04■■■■□ 3.68
CHDH-203ENST00000481668 BAZ1AQ9NRL2 1556 aaPredicted RBP37.93■■■■□ 3.66
CHDH-203ENST00000481668 NCAPD3P42695 1498 aa37.91■■■■□ 3.66
CHDH-203ENST00000481668 ATAD2BQ9ULI0 1458 aa37.87■■■■□ 3.65
CHDH-203ENST00000481668 SMARCA2P51531 1590 aa37.85■■■■□ 3.65
CHDH-203ENST00000481668 HMGXB3Q12766 1538 aa37.73■■■■□ 3.63
CHDH-203ENST00000481668 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
CHDH-203ENST00000481668 MROH2BQ7Z745 1585 aa37.64■■■■□ 3.62
CHDH-203ENST00000481668 BAZ1BQ9UIG0 1483 aaKnown RBP37.55■■■■□ 3.6
CHDH-203ENST00000481668 WIZO95785 1651 aa37.26■■■■□ 3.56
CHDH-203ENST00000481668 ERCC6Q03468 1493 aa37.08■■■■□ 3.53
CHDH-203ENST00000481668 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
CHDH-203ENST00000481668 NESP48681 1621 aa37.07■■■■□ 3.53
CHDH-203ENST00000481668 LAMC3Q9Y6N6 1575 aa37.02■■■■□ 3.52
CHDH-203ENST00000481668 TOP2AP11388 1531 aaKnown RBP36.85■■■■□ 3.49
CHDH-203ENST00000481668 CUX2O14529 1486 aa36.84■■■■□ 3.49
CHDH-203ENST00000481668 CADPSQ9ULU8 1353 aa36.77■■■■□ 3.48
CHDH-203ENST00000481668 PDS5BQ9NTI5 1447 aa36.73■■■■□ 3.47
CHDH-203ENST00000481668 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
CHDH-203ENST00000481668 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
CHDH-203ENST00000481668 CFTRP13569 1480 aa36.5■■■■□ 3.43
CHDH-203ENST00000481668 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
CHDH-203ENST00000481668 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
CHDH-203ENST00000481668 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
CHDH-203ENST00000481668 FANCD2Q9BXW9 1451 aa36.36■■■■□ 3.41
CHDH-203ENST00000481668 PRDM2Q13029 1718 aa36.35■■■■□ 3.41
CHDH-203ENST00000481668 WDR62O43379 1518 aa36.29■■■■□ 3.4
CHDH-203ENST00000481668 DNAJC5Q9H3Z4 198 aa36.06■■■■□ 3.36
CHDH-203ENST00000481668 URB2Q14146 1524 aaKnown RBP36.02■■■■□ 3.36
CHDH-203ENST00000481668 SUPT5HO00267 1087 aaKnown RBP35.83■■■■□ 3.33
CHDH-203ENST00000481668 ABCC8Q09428 1581 aa35.76■■■■□ 3.32
CHDH-203ENST00000481668 TOPBP1Q92547 1522 aa35.75■■■■□ 3.31
CHDH-203ENST00000481668 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
CHDH-203ENST00000481668 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
CHDH-203ENST00000481668 ZNF608Q9ULD9 1512 aaPredicted RBP35.45■■■■□ 3.27
CHDH-203ENST00000481668 TARBP1Q13395 1621 aaKnown RBP35.42■■■■□ 3.26
CHDH-203ENST00000481668 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
CHDH-203ENST00000481668 EIF4G3O43432 1585 aaKnown RBP35.35■■■■□ 3.25
CHDH-203ENST00000481668 CUX1P39880 1505 aa35.35■■■■□ 3.25
CHDH-203ENST00000481668 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
CHDH-203ENST00000481668 SOGA1O94964 1423 aa35.25■■■■□ 3.23
CHDH-203ENST00000481668 RAD54L2Q9Y4B4 1467 aa35.23■■■■□ 3.23
CHDH-203ENST00000481668 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
CHDH-203ENST00000481668 AQRO60306 1485 aaKnown RBP eCLIP35.19■■■■□ 3.225e-8■■■□□ 17.4
CHDH-203ENST00000481668 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
CHDH-203ENST00000481668 TDRD9Q8NDG6 1382 aaKnown RBP35.07■■■■□ 3.2
CHDH-203ENST00000481668 CHD1O14646 1710 aa35.02■■■■□ 3.2
CHDH-203ENST00000481668 BIVM-ERCC5R4GMW8 1640 aa35.02■■■■□ 3.2
CHDH-203ENST00000481668 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
CHDH-203ENST00000481668 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
CHDH-203ENST00000481668 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
CHDH-203ENST00000481668 SYNJ1O43426 1573 aa34.93■■■■□ 3.18
CHDH-203ENST00000481668 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
CHDH-203ENST00000481668 PBRM1Q86U86 1689 aa34.89■■■■□ 3.18
CHDH-203ENST00000481668 SNAPC4Q5SXM2 1469 aa34.89■■■■□ 3.18
CHDH-203ENST00000481668 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
CHDH-203ENST00000481668 GAPVD1Q14C86 1478 aa34.86■■■■□ 3.17
CHDH-203ENST00000481668 ABCA5Q8WWZ7 1642 aa34.86■■■■□ 3.17
CHDH-203ENST00000481668 FBLN2P98095 1184 aa34.82■■■■□ 3.16
CHDH-203ENST00000481668 RIMBP3CA6NJZ7 1639 aa34.74■■■■□ 3.15
CHDH-203ENST00000481668 RIMBP3BA6NNM3 1639 aa34.74■■■■□ 3.15
CHDH-203ENST00000481668 RIMBP3Q9UFD9 1639 aa34.74■■■■□ 3.15
CHDH-203ENST00000481668 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
CHDH-203ENST00000481668 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
CHDH-203ENST00000481668 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
CHDH-203ENST00000481668 ARHGEF11O15085 1522 aa34.67■■■■□ 3.14
CHDH-203ENST00000481668 CLASP1Q7Z460 1538 aa34.58■■■■□ 3.13
CHDH-203ENST00000481668 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
CHDH-203ENST00000481668 ERICH3Q5RHP9 1530 aa34.54■■■■□ 3.12
CHDH-203ENST00000481668 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
CHDH-203ENST00000481668 FHAD1B1AJZ9 1412 aa34.44■■■■□ 3.1
CHDH-203ENST00000481668 ARAP1Q96P48 1450 aa34.35■■■■□ 3.09
CHDH-203ENST00000481668 NUP160Q12769 1436 aa34.31■■■■□ 3.08
CHDH-203ENST00000481668 CYB5RLQ6IPT4 315 aa34.31■■■■□ 3.08
CHDH-203ENST00000481668 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
CHDH-203ENST00000481668 KIF27Q86VH2 1401 aa34.29■■■■□ 3.08
CHDH-203ENST00000481668 CUL7Q14999 1698 aa34.19■■■■□ 3.06
CHDH-203ENST00000481668 IGF1RP08069 1367 aa34.16■■■■□ 3.06
CHDH-203ENST00000481668 SHROOM2Q13796 1616 aa34.14■■■■□ 3.06
CHDH-203ENST00000481668 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
CHDH-203ENST00000481668 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
CHDH-203ENST00000481668 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms