RNA–Protein interactions for RNA: ENST00000481477.5

SETD4-215, Transcript of SET domain containing 4, humanhuman

TSL 1 (best)

Gene SETD4, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-215ENST00000481477 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
SETD4-215ENST00000481477 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
SETD4-215ENST00000481477 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
SETD4-215ENST00000481477 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
SETD4-215ENST00000481477 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
SETD4-215ENST00000481477 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
SETD4-215ENST00000481477 ABCC9O60706 1549 aa20.82■□□□□ 0.92
SETD4-215ENST00000481477 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
SETD4-215ENST00000481477 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
SETD4-215ENST00000481477 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
SETD4-215ENST00000481477 HRCP23327 699 aa20.46■□□□□ 0.87
SETD4-215ENST00000481477 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
SETD4-215ENST00000481477 NACADO15069 1562 aa20.24■□□□□ 0.83
SETD4-215ENST00000481477 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
SETD4-215ENST00000481477 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
SETD4-215ENST00000481477 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
SETD4-215ENST00000481477 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
SETD4-215ENST00000481477 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
SETD4-215ENST00000481477 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
SETD4-215ENST00000481477 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
SETD4-215ENST00000481477 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
SETD4-215ENST00000481477 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
SETD4-215ENST00000481477 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
SETD4-215ENST00000481477 WIZO95785 1651 aa19.89■□□□□ 0.77
SETD4-215ENST00000481477 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
SETD4-215ENST00000481477 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
SETD4-215ENST00000481477 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
SETD4-215ENST00000481477 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
SETD4-215ENST00000481477 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
SETD4-215ENST00000481477 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
SETD4-215ENST00000481477 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
SETD4-215ENST00000481477 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
SETD4-215ENST00000481477 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
SETD4-215ENST00000481477 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
SETD4-215ENST00000481477 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
SETD4-215ENST00000481477 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
SETD4-215ENST00000481477 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
SETD4-215ENST00000481477 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
SETD4-215ENST00000481477 TTBK1Q5TCY1 1321 aaPredicted RBP19.17■□□□□ 0.66
SETD4-215ENST00000481477 SOGA1O94964 1423 aa19.17■□□□□ 0.66
SETD4-215ENST00000481477 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
SETD4-215ENST00000481477 MYT1Q01538 1121 aa19.15■□□□□ 0.66
SETD4-215ENST00000481477 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
SETD4-215ENST00000481477 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
SETD4-215ENST00000481477 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
SETD4-215ENST00000481477 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
SETD4-215ENST00000481477 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
SETD4-215ENST00000481477 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
SETD4-215ENST00000481477 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
SETD4-215ENST00000481477 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
SETD4-215ENST00000481477 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
SETD4-215ENST00000481477 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
SETD4-215ENST00000481477 CEP162Q5TB80 1403 aa18.87■□□□□ 0.61
SETD4-215ENST00000481477 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
SETD4-215ENST00000481477 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
SETD4-215ENST00000481477 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
SETD4-215ENST00000481477 EEA1Q15075 1411 aa18.74■□□□□ 0.59
SETD4-215ENST00000481477 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
SETD4-215ENST00000481477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
SETD4-215ENST00000481477 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
SETD4-215ENST00000481477 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
SETD4-215ENST00000481477 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
SETD4-215ENST00000481477 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
SETD4-215ENST00000481477 CUX1P39880 1505 aa18.61■□□□□ 0.57
SETD4-215ENST00000481477 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
SETD4-215ENST00000481477 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
SETD4-215ENST00000481477 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
SETD4-215ENST00000481477 CLIP1P30622 1438 aa18.59■□□□□ 0.57
SETD4-215ENST00000481477 CFTRP13569 1480 aa18.58■□□□□ 0.56
SETD4-215ENST00000481477 KIF21BO75037 1637 aa18.53■□□□□ 0.56
SETD4-215ENST00000481477 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
SETD4-215ENST00000481477 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
SETD4-215ENST00000481477 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
SETD4-215ENST00000481477 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
SETD4-215ENST00000481477 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
SETD4-215ENST00000481477 APLP2Q06481 763 aa18.47■□□□□ 0.55
SETD4-215ENST00000481477 NESP48681 1621 aa18.44■□□□□ 0.54
SETD4-215ENST00000481477 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
SETD4-215ENST00000481477 CUX2O14529 1486 aa18.41■□□□□ 0.54
SETD4-215ENST00000481477 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
SETD4-215ENST00000481477 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
SETD4-215ENST00000481477 FGD5Q6ZNL6 1462 aa18.36■□□□□ 0.53
SETD4-215ENST00000481477 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
SETD4-215ENST00000481477 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
SETD4-215ENST00000481477 KANK4Q5T7N3 995 aaPredicted RBP18.3■□□□□ 0.52
SETD4-215ENST00000481477 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
SETD4-215ENST00000481477 IGF1RP08069 1367 aa18.29■□□□□ 0.52
SETD4-215ENST00000481477 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
SETD4-215ENST00000481477 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
SETD4-215ENST00000481477 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.52
SETD4-215ENST00000481477 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
SETD4-215ENST00000481477 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
SETD4-215ENST00000481477 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
SETD4-215ENST00000481477 ITGAEP38570 1179 aa18.21■□□□□ 0.51
SETD4-215ENST00000481477 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
SETD4-215ENST00000481477 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
SETD4-215ENST00000481477 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
SETD4-215ENST00000481477 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
SETD4-215ENST00000481477 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
SETD4-215ENST00000481477 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms