RNA–Protein interactions for RNA: ENST00000481140.5

PRKCZ-217, Transcript of protein kinase C zeta, humanhuman

TSL 4

Gene PRKCZ, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-217ENST00000481140 PTBP1P26599 531 aaKnown RBP eCLIP6.29□□□□□ -1.49e-15■■■□□ 19.1
PRKCZ-217ENST00000481140 MATR3P43243 847 aaKnown RBP eCLIP8.13□□□□□ -1.111e-13■■■□□ 18.6
PRKCZ-217ENST00000481140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.77□□□□□ -1.012e-11■■■■■ 27.2
PRKCZ-217ENST00000481140 SF3B1O75533 1304 aaKnown RBP eCLIP7.97□□□□□ -1.133e-9■■■■■ 206.8
PRKCZ-217ENST00000481140 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.59□□□□□ -1.197e-9■■■■■ 72.6
PRKCZ-217ENST00000481140 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.13e-8■■□□□ 11.6
PRKCZ-217ENST00000481140 PPIGQ13427 754 aaKnown RBP eCLIP8.07□□□□□ -1.126e-8■□□□□ 9.7
PRKCZ-217ENST00000481140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.94□□□□□ -1.147e-8■■■■■ 186.3
PRKCZ-217ENST00000481140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.26□□□□□ -1.411e-7■■■■■ 51.6
PRKCZ-217ENST00000481140 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■■■ 47.2
PRKCZ-217ENST00000481140 HNRNPKP61978 463 aaKnown RBP eCLIP7.3□□□□□ -1.243e-7■■■□□ 17.6
PRKCZ-217ENST00000481140 PCBP2Q15366 365 aaKnown RBP eCLIP7.24□□□□□ -1.254e-7■■■■■ 53.8
PRKCZ-217ENST00000481140 GTF2F1P35269 517 aaKnown RBP eCLIP7.74□□□□□ -1.175e-7■■■□□ 15.3
PRKCZ-217ENST00000481140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.326e-7■■■□□ 17.9
PRKCZ-217ENST00000481140 PRPF4O43172 522 aaKnown RBP eCLIP7.34□□□□□ -1.236e-7■■■■□ 21.5
PRKCZ-217ENST00000481140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.03□□□□□ -1.449e-7■■■□□ 16.8
PRKCZ-217ENST00000481140 HNRNPLP14866 589 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■■□□□ 11.7
PRKCZ-217ENST00000481140 EFTUD2Q15029 972 aaKnown RBP eCLIP7.38□□□□□ -1.231e-6■■■■■ 28.2
PRKCZ-217ENST00000481140 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.93□□□□□ -1.31e-6■■■■■ 33
PRKCZ-217ENST00000481140 BCCIPQ9P287 314 aaKnown RBP eCLIP8.57□□□□□ -1.041e-6■■■■■ 35.1
PRKCZ-217ENST00000481140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.171e-6■■■■□ 21.6
PRKCZ-217ENST00000481140 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.133e-6■■□□□ 11.7
PRKCZ-217ENST00000481140 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.343e-6■■■■□ 20.6
PRKCZ-217ENST00000481140 ILF3Q12906 894 aaKnown RBP eCLIP7.31□□□□□ -1.243e-6■■■□□ 16
PRKCZ-217ENST00000481140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■■□□ 16.3
PRKCZ-217ENST00000481140 NKRFO15226 690 aaKnown RBP eCLIP8.4□□□□□ -1.064e-6■■■□□ 16.4
PRKCZ-217ENST00000481140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.75□□□□□ -1.175e-6■■■□□ 17.9
PRKCZ-217ENST00000481140 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.086e-6■■■■■ 28
PRKCZ-217ENST00000481140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.9□□□□□ -1.148e-6■■■■□ 22
Retrieved 29 of 29 RNA–protein pairs in 13.4 ms