RNA–Protein interactions for RNA: ENST00000481044.6

ACTR1A-204, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 2

Gene ACTR1A, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-204ENST00000481044 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
ACTR1A-204ENST00000481044 ABCC9O60706 1549 aa22.22■■□□□ 1.15
ACTR1A-204ENST00000481044 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
ACTR1A-204ENST00000481044 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
ACTR1A-204ENST00000481044 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
ACTR1A-204ENST00000481044 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
ACTR1A-204ENST00000481044 NACADO15069 1562 aa20.44■□□□□ 0.86
ACTR1A-204ENST00000481044 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
ACTR1A-204ENST00000481044 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
ACTR1A-204ENST00000481044 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
ACTR1A-204ENST00000481044 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
ACTR1A-204ENST00000481044 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
ACTR1A-204ENST00000481044 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
ACTR1A-204ENST00000481044 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
ACTR1A-204ENST00000481044 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
ACTR1A-204ENST00000481044 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
ACTR1A-204ENST00000481044 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
ACTR1A-204ENST00000481044 CUX2O14529 1486 aa19.42■□□□□ 0.7
ACTR1A-204ENST00000481044 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
ACTR1A-204ENST00000481044 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
ACTR1A-204ENST00000481044 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
ACTR1A-204ENST00000481044 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
ACTR1A-204ENST00000481044 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
ACTR1A-204ENST00000481044 NESP48681 1621 aa18.89■□□□□ 0.61
ACTR1A-204ENST00000481044 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
ACTR1A-204ENST00000481044 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
ACTR1A-204ENST00000481044 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
ACTR1A-204ENST00000481044 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
ACTR1A-204ENST00000481044 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
ACTR1A-204ENST00000481044 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
ACTR1A-204ENST00000481044 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
ACTR1A-204ENST00000481044 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
ACTR1A-204ENST00000481044 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
ACTR1A-204ENST00000481044 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
ACTR1A-204ENST00000481044 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
ACTR1A-204ENST00000481044 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
ACTR1A-204ENST00000481044 WDR62O43379 1518 aa18.36■□□□□ 0.53
ACTR1A-204ENST00000481044 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
ACTR1A-204ENST00000481044 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
ACTR1A-204ENST00000481044 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
ACTR1A-204ENST00000481044 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
ACTR1A-204ENST00000481044 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
ACTR1A-204ENST00000481044 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
ACTR1A-204ENST00000481044 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
ACTR1A-204ENST00000481044 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
ACTR1A-204ENST00000481044 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
ACTR1A-204ENST00000481044 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
ACTR1A-204ENST00000481044 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
ACTR1A-204ENST00000481044 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
ACTR1A-204ENST00000481044 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
ACTR1A-204ENST00000481044 CFTRP13569 1480 aa17.96■□□□□ 0.47
ACTR1A-204ENST00000481044 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
ACTR1A-204ENST00000481044 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
ACTR1A-204ENST00000481044 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
ACTR1A-204ENST00000481044 WIZO95785 1651 aa17.86■□□□□ 0.45
ACTR1A-204ENST00000481044 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
ACTR1A-204ENST00000481044 FBLN2P98095 1184 aa17.74■□□□□ 0.43
ACTR1A-204ENST00000481044 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.423e-6■■□□□ 13.8
ACTR1A-204ENST00000481044 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
ACTR1A-204ENST00000481044 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
ACTR1A-204ENST00000481044 CHD1O14646 1710 aa17.67■□□□□ 0.42
ACTR1A-204ENST00000481044 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
ACTR1A-204ENST00000481044 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
ACTR1A-204ENST00000481044 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
ACTR1A-204ENST00000481044 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
ACTR1A-204ENST00000481044 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
ACTR1A-204ENST00000481044 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
ACTR1A-204ENST00000481044 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
ACTR1A-204ENST00000481044 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
ACTR1A-204ENST00000481044 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
ACTR1A-204ENST00000481044 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
ACTR1A-204ENST00000481044 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
ACTR1A-204ENST00000481044 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
ACTR1A-204ENST00000481044 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
ACTR1A-204ENST00000481044 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
ACTR1A-204ENST00000481044 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
ACTR1A-204ENST00000481044 SOGA1O94964 1423 aa17.39■□□□□ 0.38
ACTR1A-204ENST00000481044 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
ACTR1A-204ENST00000481044 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
ACTR1A-204ENST00000481044 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
ACTR1A-204ENST00000481044 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
ACTR1A-204ENST00000481044 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
ACTR1A-204ENST00000481044 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
ACTR1A-204ENST00000481044 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
ACTR1A-204ENST00000481044 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
ACTR1A-204ENST00000481044 FAM69CQ0P6D2 419 aa17.15■□□□□ 0.34
ACTR1A-204ENST00000481044 CUX1P39880 1505 aa17.1■□□□□ 0.33
ACTR1A-204ENST00000481044 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
ACTR1A-204ENST00000481044 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
ACTR1A-204ENST00000481044 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
ACTR1A-204ENST00000481044 NUP160Q12769 1436 aa17.06■□□□□ 0.32
ACTR1A-204ENST00000481044 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
ACTR1A-204ENST00000481044 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
ACTR1A-204ENST00000481044 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
ACTR1A-204ENST00000481044 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
ACTR1A-204ENST00000481044 KDM6BO15054 1643 aa16.97■□□□□ 0.31
ACTR1A-204ENST00000481044 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
ACTR1A-204ENST00000481044 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
ACTR1A-204ENST00000481044 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
ACTR1A-204ENST00000481044 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms