RNA–Protein interactions for RNA: ENST00000480506.5

GMPPA-210, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 5

Gene GMPPA, Length 835 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-210ENST00000480506 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
GMPPA-210ENST00000480506 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.89
GMPPA-210ENST00000480506 ABCC9O60706 1549 aa26.49■■□□□ 1.83
GMPPA-210ENST00000480506 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
GMPPA-210ENST00000480506 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
GMPPA-210ENST00000480506 NACADO15069 1562 aa25.31■■□□□ 1.64
GMPPA-210ENST00000480506 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
GMPPA-210ENST00000480506 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
GMPPA-210ENST00000480506 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
GMPPA-210ENST00000480506 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
GMPPA-210ENST00000480506 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
GMPPA-210ENST00000480506 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
GMPPA-210ENST00000480506 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
GMPPA-210ENST00000480506 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
GMPPA-210ENST00000480506 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
GMPPA-210ENST00000480506 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
GMPPA-210ENST00000480506 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
GMPPA-210ENST00000480506 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
GMPPA-210ENST00000480506 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
GMPPA-210ENST00000480506 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
GMPPA-210ENST00000480506 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
GMPPA-210ENST00000480506 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
GMPPA-210ENST00000480506 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
GMPPA-210ENST00000480506 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
GMPPA-210ENST00000480506 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
GMPPA-210ENST00000480506 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
GMPPA-210ENST00000480506 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
GMPPA-210ENST00000480506 WIZO95785 1651 aa22.98■■□□□ 1.27
GMPPA-210ENST00000480506 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
GMPPA-210ENST00000480506 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
GMPPA-210ENST00000480506 NESP48681 1621 aa22.84■■□□□ 1.25
GMPPA-210ENST00000480506 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
GMPPA-210ENST00000480506 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
GMPPA-210ENST00000480506 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
GMPPA-210ENST00000480506 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
GMPPA-210ENST00000480506 CUX2O14529 1486 aa22.62■■□□□ 1.21
GMPPA-210ENST00000480506 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
GMPPA-210ENST00000480506 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
GMPPA-210ENST00000480506 CFTRP13569 1480 aa22.5■■□□□ 1.19
GMPPA-210ENST00000480506 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
GMPPA-210ENST00000480506 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
GMPPA-210ENST00000480506 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
GMPPA-210ENST00000480506 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
GMPPA-210ENST00000480506 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
GMPPA-210ENST00000480506 WDR62O43379 1518 aa22.3■■□□□ 1.16
GMPPA-210ENST00000480506 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
GMPPA-210ENST00000480506 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
GMPPA-210ENST00000480506 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
GMPPA-210ENST00000480506 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
GMPPA-210ENST00000480506 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
GMPPA-210ENST00000480506 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
GMPPA-210ENST00000480506 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
GMPPA-210ENST00000480506 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
GMPPA-210ENST00000480506 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
GMPPA-210ENST00000480506 SOGA1O94964 1423 aa21.82■■□□□ 1.08
GMPPA-210ENST00000480506 CUX1P39880 1505 aa21.81■■□□□ 1.08
GMPPA-210ENST00000480506 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
GMPPA-210ENST00000480506 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
GMPPA-210ENST00000480506 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
GMPPA-210ENST00000480506 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■■■ 29.1
GMPPA-210ENST00000480506 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
GMPPA-210ENST00000480506 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
GMPPA-210ENST00000480506 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
GMPPA-210ENST00000480506 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
GMPPA-210ENST00000480506 FBLN2P98095 1184 aa21.66■■□□□ 1.06
GMPPA-210ENST00000480506 WDR97A6NE52 1622 aa21.61■■□□□ 1.05
GMPPA-210ENST00000480506 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
GMPPA-210ENST00000480506 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
GMPPA-210ENST00000480506 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
GMPPA-210ENST00000480506 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
GMPPA-210ENST00000480506 BIVM-ERCC5R4GMW8 1640 aa21.56■■□□□ 1.04
GMPPA-210ENST00000480506 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
GMPPA-210ENST00000480506 SNAPC4Q5SXM2 1469 aa21.54■■□□□ 1.04
GMPPA-210ENST00000480506 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
GMPPA-210ENST00000480506 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
GMPPA-210ENST00000480506 CHD1O14646 1710 aa21.47■■□□□ 1.03
GMPPA-210ENST00000480506 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
GMPPA-210ENST00000480506 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
GMPPA-210ENST00000480506 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
GMPPA-210ENST00000480506 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
GMPPA-210ENST00000480506 ARHGEF11O15085 1522 aa21.3■■□□□ 1
GMPPA-210ENST00000480506 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
GMPPA-210ENST00000480506 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
GMPPA-210ENST00000480506 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
GMPPA-210ENST00000480506 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
GMPPA-210ENST00000480506 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
GMPPA-210ENST00000480506 KIF27Q86VH2 1401 aa21.28■■□□□ 1
GMPPA-210ENST00000480506 ADAMTS12P58397 1594 aa21.27■■□□□ 1
GMPPA-210ENST00000480506 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
GMPPA-210ENST00000480506 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
GMPPA-210ENST00000480506 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
GMPPA-210ENST00000480506 IGF1RP08069 1367 aa21.15■□□□□ 0.98
GMPPA-210ENST00000480506 NUP160Q12769 1436 aa21.13■□□□□ 0.97
GMPPA-210ENST00000480506 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
GMPPA-210ENST00000480506 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
GMPPA-210ENST00000480506 CUL7Q14999 1698 aa21.09■□□□□ 0.97
GMPPA-210ENST00000480506 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
GMPPA-210ENST00000480506 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
GMPPA-210ENST00000480506 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
GMPPA-210ENST00000480506 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms