RNA–Protein interactions for RNA: ENST00000479901.5

AGAP3-216, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 5 BASIC

Gene AGAP3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-216ENST00000479901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.55■■■□□ 2.166e-7■■■■■ 151.5
AGAP3-216ENST00000479901 SF3B1O75533 1304 aaKnown RBP eCLIP27.52■■■□□ 21e-6■■■■■ 94.8
AGAP3-216ENST00000479901 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.87■■□□□ 1.893e-6■■■■■ 69.6
AGAP3-216ENST00000479901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.35■■■□□ 2.295e-6■■■■■ 39.1
AGAP3-216ENST00000479901 SF3B4Q15427 424 aaKnown RBP eCLIP23.92■■□□□ 1.423e-6■■■■■ 37.5
AGAP3-216ENST00000479901 PCBP2Q15366 365 aaKnown RBP eCLIP26.3■■□□□ 1.81e-6■■■■■ 33.3
AGAP3-216ENST00000479901 PTBP1P26599 531 aaKnown RBP eCLIP24.41■■□□□ 1.53e-12■■■■■ 32.3
AGAP3-216ENST00000479901 XRCC6P12956 609 aaKnown RBP eCLIP32.08■■■□□ 2.736e-6■■■■■ 31.4
AGAP3-216ENST00000479901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.21■□□□□ 0.837e-12■■■■■ 31.2
AGAP3-216ENST00000479901 HNRNPMP52272 730 aaKnown RBP eCLIP37.36■■■■□ 3.579e-13■■■■■ 29.6
AGAP3-216ENST00000479901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.02■■□□□ 1.61e-7■■■■■ 29.1
AGAP3-216ENST00000479901 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.49■■□□□ 1.516e-8■■■■■ 27.7
AGAP3-216ENST00000479901 AARSP49588 968 aaKnown RBP eCLIP28.91■■■□□ 2.224e-6■■■■■ 27.3
AGAP3-216ENST00000479901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.64■■■□□ 2.017e-7■■■■■ 27.1
AGAP3-216ENST00000479901 AQRO60306 1485 aaKnown RBP eCLIP41.1■■■■■ 4.174e-7■■■■■ 26.9
AGAP3-216ENST00000479901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.54■■■□□ 2.169e-7■■■■□ 26.7
AGAP3-216ENST00000479901 WRNQ14191 1432 aaPredicted RBP eCLIP42.29■■■■■ 4.363e-6■■■■□ 25.8
AGAP3-216ENST00000479901 FMR1Q06787 632 aaKnown RBP eCLIP30.23■■■□□ 2.432e-6■■■■□ 25.5
AGAP3-216ENST00000479901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.93■■□□□ 1.94e-7■■■■□ 25.1
AGAP3-216ENST00000479901 HNRNPKP61978 463 aaKnown RBP eCLIP24.47■■□□□ 1.514e-7■■■■□ 24.9
AGAP3-216ENST00000479901 NONOQ15233 471 aaKnown RBP eCLIP30.08■■■□□ 2.415e-7■■■■□ 24.8
AGAP3-216ENST00000479901 FXR2P51116 673 aaKnown RBP eCLIP29.89■■■□□ 2.381e-6■■■■□ 24.7
AGAP3-216ENST00000479901 SMNDC1O75940 238 aaKnown RBP eCLIP26.51■■□□□ 1.832e-6■■■■□ 24.6
AGAP3-216ENST00000479901 HNRNPLP14866 589 aaKnown RBP eCLIP26.61■■□□□ 1.853e-7■■■■□ 23.8
AGAP3-216ENST00000479901 EIF4G2P78344 907 aaKnown RBP eCLIP37.43■■■■□ 3.582e-6■■■■□ 23.5
AGAP3-216ENST00000479901 EFTUD2Q15029 972 aaKnown RBP eCLIP27.6■■■□□ 2.018e-10■■■■□ 23.4
AGAP3-216ENST00000479901 RBFOX2O43251 390 aaKnown RBP eCLIP22.06■■□□□ 1.121e-6■■■■□ 23.1
AGAP3-216ENST00000479901 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.49■■□□□ 1.992e-6■■■■□ 22
AGAP3-216ENST00000479901 PCBP1Q15365 356 aaKnown RBP eCLIP27.93■■■□□ 2.061e-8■■■■□ 21.7
AGAP3-216ENST00000479901 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.77■■■□□ 2.21e-8■■■■□ 21.5
AGAP3-216ENST00000479901 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.44■■■□□ 2.621e-8■■■■□ 21.2
AGAP3-216ENST00000479901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.24■■□□□ 1.475e-7■■■■□ 21.1
AGAP3-216ENST00000479901 CSTF2P33240 577 aaKnown RBP eCLIP24.93■■□□□ 1.582e-12■■■■□ 21.1
AGAP3-216ENST00000479901 SFPQP23246 707 aaKnown RBP eCLIP30.27■■■□□ 2.444e-6■■■■□ 20.8
AGAP3-216ENST00000479901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.82■■■■□ 3.646e-7■■■■□ 20.4
AGAP3-216ENST00000479901 DKC1O60832 514 aaKnown RBP eCLIP28.89■■■□□ 2.224e-8■■■■□ 20.4
AGAP3-216ENST00000479901 MATR3P43243 847 aaKnown RBP eCLIP28.87■■■□□ 2.213e-6■■■■□ 20.3
AGAP3-216ENST00000479901 TARDBPQ13148 414 aaKnown RBP eCLIP24.98■■□□□ 1.593e-6■■■■□ 20.1
AGAP3-216ENST00000479901 DDX6P26196 483 aaKnown RBP eCLIP26.15■■□□□ 1.782e-6■■■■□ 19.5
AGAP3-216ENST00000479901 FUSP35637 526 aaKnown RBP eCLIP16.77■□□□□ 0.277e-7■■■■□ 19.3
AGAP3-216ENST00000479901 ZC3H11AO75152 810 aaKnown RBP eCLIP28.67■■■□□ 2.187e-7■■■■□ 19.3
AGAP3-216ENST00000479901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.72■■■■□ 3.476e-6■■■□□ 19.2
AGAP3-216ENST00000479901 SUB1P53999 127 aaKnown RBP eCLIP21.49■■□□□ 1.033e-7■■■□□ 18.9
AGAP3-216ENST00000479901 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.48■■□□□ 1.677e-7■■■□□ 18.6
AGAP3-216ENST00000479901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.69■■■□□ 2.52e-6■■■□□ 18.5
AGAP3-216ENST00000479901 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.38■■□□□ 1.814e-6■■■□□ 18.5
AGAP3-216ENST00000479901 ILF3Q12906 894 aaKnown RBP eCLIP24.93■■□□□ 1.581e-7■■■□□ 18.3
AGAP3-216ENST00000479901 LSM11P83369 360 aaKnown RBP eCLIP24.83■■□□□ 1.571e-6■■■□□ 17.8
AGAP3-216ENST00000479901 NKRFO15226 690 aaKnown RBP eCLIP29.46■■■□□ 2.312e-7■■■□□ 17.2
AGAP3-216ENST00000479901 EWSR1Q01844 656 aaKnown RBP eCLIP22.48■■□□□ 1.194e-7■■■□□ 17.1
AGAP3-216ENST00000479901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.01■■□□□ 1.912e-6■■■□□ 16.7
AGAP3-216ENST00000479901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.3■■■■□ 3.886e-8■■■□□ 14.6
AGAP3-216ENST00000479901 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.55■■□□□ 1.685e-7■■□□□ 14.3
AGAP3-216ENST00000479901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.91■■■□□ 2.383e-6■■□□□ 13.1
AGAP3-216ENST00000479901 GPKOWQ92917 476 aaPredicted RBP eCLIP30.22■■■□□ 2.433e-6■■□□□ 12.9
AGAP3-216ENST00000479901 YBX3P16989 372 aaKnown RBP eCLIP30.42■■■□□ 2.462e-7■■□□□ 12.5
AGAP3-216ENST00000479901 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.17■■□□□ 1.949e-7■■□□□ 12.2
AGAP3-216ENST00000479901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.56■■■□□ 2.169e-7■■□□□ 12.1
AGAP3-216ENST00000479901 GTF2F1P35269 517 aaKnown RBP eCLIP30.4■■■□□ 2.461e-6■■□□□ 12
AGAP3-216ENST00000479901 LARP4Q71RC2 724 aaKnown RBP eCLIP26.49■■□□□ 1.835e-7■■□□□ 11.8
AGAP3-216ENST00000479901 TIA1P31483 386 aaKnown RBP eCLIP25.65■■□□□ 1.72e-6■■□□□ 11.5
AGAP3-216ENST00000479901 PPIGQ13427 754 aaKnown RBP eCLIP26.6■■□□□ 1.857e-8■■□□□ 11.4
AGAP3-216ENST00000479901 METAP2P50579 478 aaKnown RBP eCLIP31.02■■■□□ 2.561e-6■□□□□ 11
AGAP3-216ENST00000479901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.95■■■□□ 2.541e-5■□□□□ 10.5
AGAP3-216ENST00000479901 PUM1Q14671 1186 aaKnown RBP eCLIP25.19■■□□□ 1.627e-9■□□□□ 10.3
AGAP3-216ENST00000479901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.57■■■□□ 25e-7■□□□□ 9.5
AGAP3-216ENST00000479901 U2AF2P26368 475 aaKnown RBP eCLIP30.84■■■□□ 2.531e-5■□□□□ 9.3
AGAP3-216ENST00000479901 AATFQ9NY61 560 aaKnown RBP eCLIP30.63■■■□□ 2.497e-7■□□□□ 9.1
AGAP3-216ENST00000479901 NIPBLQ6KC79 2804 aaeCLIP20.11■□□□□ 0.816e-6■□□□□ 9
AGAP3-216ENST00000479901 PABPC4Q13310 644 aaKnown RBP eCLIP29.37■■■□□ 2.291e-11■□□□□ 8.4
Retrieved 70 of 70 RNA–protein pairs in 290.7 ms