RNA–Protein interactions for RNA: ENST00000479590.1

TBCCD1-206, Transcript of TBCC domain containing 1, humanhuman

TSL 3

Gene TBCCD1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-206ENST00000479590 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
TBCCD1-206ENST00000479590 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
TBCCD1-206ENST00000479590 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
TBCCD1-206ENST00000479590 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
TBCCD1-206ENST00000479590 FOXD1Q16676 465 aa21.49■■□□□ 1.03
TBCCD1-206ENST00000479590 POTEDQ86YR6 584 aa20.39■□□□□ 0.85
TBCCD1-206ENST00000479590 MSH5O43196 834 aa20.29■□□□□ 0.84
TBCCD1-206ENST00000479590 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
TBCCD1-206ENST00000479590 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
TBCCD1-206ENST00000479590 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TBCCD1-206ENST00000479590 ADRA2BP18089 450 aa19.72■□□□□ 0.75
TBCCD1-206ENST00000479590 MAPK8IP2Q13387 824 aaPredicted RBP18.22■□□□□ 0.51
TBCCD1-206ENST00000479590 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
TBCCD1-206ENST00000479590 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
TBCCD1-206ENST00000479590 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
TBCCD1-206ENST00000479590 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
TBCCD1-206ENST00000479590 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
TBCCD1-206ENST00000479590 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
TBCCD1-206ENST00000479590 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
TBCCD1-206ENST00000479590 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
TBCCD1-206ENST00000479590 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
TBCCD1-206ENST00000479590 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
TBCCD1-206ENST00000479590 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
TBCCD1-206ENST00000479590 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
TBCCD1-206ENST00000479590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
TBCCD1-206ENST00000479590 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
TBCCD1-206ENST00000479590 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
TBCCD1-206ENST00000479590 CAPN15O75808 1086 aa16.05■□□□□ 0.16
TBCCD1-206ENST00000479590 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
TBCCD1-206ENST00000479590 DSG3P32926 999 aa16.03■□□□□ 0.16
TBCCD1-206ENST00000479590 POTEHQ6S545 545 aa15.92■□□□□ 0.14
TBCCD1-206ENST00000479590 KCNA4P22459 653 aa15.9■□□□□ 0.14
TBCCD1-206ENST00000479590 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
TBCCD1-206ENST00000479590 APLP2Q06481 763 aa15.73■□□□□ 0.11
TBCCD1-206ENST00000479590 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
TBCCD1-206ENST00000479590 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
TBCCD1-206ENST00000479590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
TBCCD1-206ENST00000479590 ABCB7O75027 752 aa15.63■□□□□ 0.09
TBCCD1-206ENST00000479590 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
TBCCD1-206ENST00000479590 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
TBCCD1-206ENST00000479590 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
TBCCD1-206ENST00000479590 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
TBCCD1-206ENST00000479590 POLA2Q14181 598 aa15.2■□□□□ 0.02
TBCCD1-206ENST00000479590 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
TBCCD1-206ENST00000479590 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
TBCCD1-206ENST00000479590 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
TBCCD1-206ENST00000479590 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
TBCCD1-206ENST00000479590 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
TBCCD1-206ENST00000479590 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
TBCCD1-206ENST00000479590 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
TBCCD1-206ENST00000479590 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
TBCCD1-206ENST00000479590 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
TBCCD1-206ENST00000479590 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
TBCCD1-206ENST00000479590 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
TBCCD1-206ENST00000479590 ZBTB22O15209 634 aa14.61□□□□□ -0.07
TBCCD1-206ENST00000479590 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
TBCCD1-206ENST00000479590 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.08
TBCCD1-206ENST00000479590 HAX1O00165 279 aa14.53□□□□□ -0.08
TBCCD1-206ENST00000479590 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
TBCCD1-206ENST00000479590 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
TBCCD1-206ENST00000479590 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
TBCCD1-206ENST00000479590 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
TBCCD1-206ENST00000479590 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
TBCCD1-206ENST00000479590 FBLN2P98095 1184 aa14.37□□□□□ -0.11
TBCCD1-206ENST00000479590 EVX2Q03828 476 aa14.29□□□□□ -0.12
TBCCD1-206ENST00000479590 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
TBCCD1-206ENST00000479590 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
TBCCD1-206ENST00000479590 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
TBCCD1-206ENST00000479590 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
TBCCD1-206ENST00000479590 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
TBCCD1-206ENST00000479590 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
TBCCD1-206ENST00000479590 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
TBCCD1-206ENST00000479590 GABBR2O75899 941 aa13.97□□□□□ -0.17
TBCCD1-206ENST00000479590 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
TBCCD1-206ENST00000479590 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
TBCCD1-206ENST00000479590 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
TBCCD1-206ENST00000479590 LHX8Q68G74 356 aa13.84□□□□□ -0.19
TBCCD1-206ENST00000479590 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
TBCCD1-206ENST00000479590 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
TBCCD1-206ENST00000479590 CLCN6P51797 869 aa13.67□□□□□ -0.22
TBCCD1-206ENST00000479590 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
TBCCD1-206ENST00000479590 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
TBCCD1-206ENST00000479590 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
TBCCD1-206ENST00000479590 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
TBCCD1-206ENST00000479590 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
TBCCD1-206ENST00000479590 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
TBCCD1-206ENST00000479590 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
TBCCD1-206ENST00000479590 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
TBCCD1-206ENST00000479590 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
TBCCD1-206ENST00000479590 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
TBCCD1-206ENST00000479590 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
TBCCD1-206ENST00000479590 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
TBCCD1-206ENST00000479590 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
TBCCD1-206ENST00000479590 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
TBCCD1-206ENST00000479590 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
TBCCD1-206ENST00000479590 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
TBCCD1-206ENST00000479590 FKBP8Q14318 412 aa13.12□□□□□ -0.31
TBCCD1-206ENST00000479590 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
TBCCD1-206ENST00000479590 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
TBCCD1-206ENST00000479590 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms