RNA–Protein interactions for RNA: ENST00000479314.1

ZDHHC3-211, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 2

Gene ZDHHC3, Length 872 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-211ENST00000479314 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
ZDHHC3-211ENST00000479314 ABCC9O60706 1549 aa23.49■■□□□ 1.35
ZDHHC3-211ENST00000479314 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
ZDHHC3-211ENST00000479314 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
ZDHHC3-211ENST00000479314 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
ZDHHC3-211ENST00000479314 NACADO15069 1562 aa22.03■■□□□ 1.12
ZDHHC3-211ENST00000479314 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
ZDHHC3-211ENST00000479314 PABPN1Q86U42 306 aaKnown RBP eCLIP21.74■■□□□ 1.07
ZDHHC3-211ENST00000479314 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
ZDHHC3-211ENST00000479314 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
ZDHHC3-211ENST00000479314 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
ZDHHC3-211ENST00000479314 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.02
ZDHHC3-211ENST00000479314 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
ZDHHC3-211ENST00000479314 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
ZDHHC3-211ENST00000479314 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
ZDHHC3-211ENST00000479314 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
ZDHHC3-211ENST00000479314 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
ZDHHC3-211ENST00000479314 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
ZDHHC3-211ENST00000479314 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
ZDHHC3-211ENST00000479314 CUX2O14529 1486 aa20.52■□□□□ 0.88
ZDHHC3-211ENST00000479314 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
ZDHHC3-211ENST00000479314 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
ZDHHC3-211ENST00000479314 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
ZDHHC3-211ENST00000479314 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
ZDHHC3-211ENST00000479314 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
ZDHHC3-211ENST00000479314 NESP48681 1621 aa20.09■□□□□ 0.81
ZDHHC3-211ENST00000479314 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
ZDHHC3-211ENST00000479314 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
ZDHHC3-211ENST00000479314 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
ZDHHC3-211ENST00000479314 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
ZDHHC3-211ENST00000479314 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
ZDHHC3-211ENST00000479314 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
ZDHHC3-211ENST00000479314 KIF21AQ7Z4S6 1674 aa19.85■□□□□ 0.77
ZDHHC3-211ENST00000479314 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
ZDHHC3-211ENST00000479314 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
ZDHHC3-211ENST00000479314 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
ZDHHC3-211ENST00000479314 WDR62O43379 1518 aa19.68■□□□□ 0.74
ZDHHC3-211ENST00000479314 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
ZDHHC3-211ENST00000479314 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
ZDHHC3-211ENST00000479314 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
ZDHHC3-211ENST00000479314 WIZO95785 1651 aa19.42■□□□□ 0.7
ZDHHC3-211ENST00000479314 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
ZDHHC3-211ENST00000479314 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
ZDHHC3-211ENST00000479314 CFTRP13569 1480 aa19.38■□□□□ 0.69
ZDHHC3-211ENST00000479314 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
ZDHHC3-211ENST00000479314 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.68
ZDHHC3-211ENST00000479314 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.68
ZDHHC3-211ENST00000479314 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.68
ZDHHC3-211ENST00000479314 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
ZDHHC3-211ENST00000479314 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
ZDHHC3-211ENST00000479314 PRDM2Q13029 1718 aa19.16■□□□□ 0.66
ZDHHC3-211ENST00000479314 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
ZDHHC3-211ENST00000479314 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
ZDHHC3-211ENST00000479314 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
ZDHHC3-211ENST00000479314 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
ZDHHC3-211ENST00000479314 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
ZDHHC3-211ENST00000479314 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
ZDHHC3-211ENST00000479314 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
ZDHHC3-211ENST00000479314 CHD1O14646 1710 aa18.94■□□□□ 0.62
ZDHHC3-211ENST00000479314 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
ZDHHC3-211ENST00000479314 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
ZDHHC3-211ENST00000479314 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
ZDHHC3-211ENST00000479314 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
ZDHHC3-211ENST00000479314 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.61
ZDHHC3-211ENST00000479314 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
ZDHHC3-211ENST00000479314 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
ZDHHC3-211ENST00000479314 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
ZDHHC3-211ENST00000479314 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
ZDHHC3-211ENST00000479314 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
ZDHHC3-211ENST00000479314 FBLN2P98095 1184 aa18.69■□□□□ 0.58
ZDHHC3-211ENST00000479314 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
ZDHHC3-211ENST00000479314 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
ZDHHC3-211ENST00000479314 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
ZDHHC3-211ENST00000479314 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
ZDHHC3-211ENST00000479314 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
ZDHHC3-211ENST00000479314 SOGA1O94964 1423 aa18.65■□□□□ 0.58
ZDHHC3-211ENST00000479314 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
ZDHHC3-211ENST00000479314 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
ZDHHC3-211ENST00000479314 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
ZDHHC3-211ENST00000479314 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
ZDHHC3-211ENST00000479314 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
ZDHHC3-211ENST00000479314 CUX1P39880 1505 aa18.54■□□□□ 0.56
ZDHHC3-211ENST00000479314 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
ZDHHC3-211ENST00000479314 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
ZDHHC3-211ENST00000479314 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
ZDHHC3-211ENST00000479314 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
ZDHHC3-211ENST00000479314 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
ZDHHC3-211ENST00000479314 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
ZDHHC3-211ENST00000479314 NUP160Q12769 1436 aa18.35■□□□□ 0.53
ZDHHC3-211ENST00000479314 SHROOM2Q13796 1616 aa18.34■□□□□ 0.53
ZDHHC3-211ENST00000479314 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
ZDHHC3-211ENST00000479314 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
ZDHHC3-211ENST00000479314 KIF13AQ9H1H9 1805 aa18.3■□□□□ 0.52
ZDHHC3-211ENST00000479314 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
ZDHHC3-211ENST00000479314 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
ZDHHC3-211ENST00000479314 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
ZDHHC3-211ENST00000479314 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
ZDHHC3-211ENST00000479314 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
ZDHHC3-211ENST00000479314 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.49
ZDHHC3-211ENST00000479314 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms