RNA–Protein interactions for RNA: ENST00000478585.5

GNAS-235, Transcript of GNAS complex locus, humanhuman

TSL 2

Gene GNAS, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-235ENST00000478585 TRA2AQ13595 282 aaKnown RBP eCLIP25.98■■□□□ 1.757e-17■■■■■ 73.3
GNAS-235ENST00000478585 GTF2F1P35269 517 aaKnown RBP eCLIP29.24■■■□□ 2.272e-9■■■■■ 69.5
GNAS-235ENST00000478585 AGGF1Q8N302 714 aaeCLIP25.02■■□□□ 1.63e-8■■■■■ 55.1
GNAS-235ENST00000478585 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.42■■■□□ 2.623e-7■■■■■ 43.7
GNAS-235ENST00000478585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.7■■■□□ 2.024e-6■■■■■ 41.6
GNAS-235ENST00000478585 SF3B1O75533 1304 aaKnown RBP eCLIP28.83■■■□□ 2.211e-6■■■■■ 35.8
GNAS-235ENST00000478585 NCBP2P52298 156 aaKnown RBP eCLIP23.88■■□□□ 1.413e-11■■■■■ 33.2
GNAS-235ENST00000478585 NONOQ15233 471 aaKnown RBP eCLIP29.6■■■□□ 2.336e-7■■■■■ 32.8
GNAS-235ENST00000478585 PCBP2Q15366 365 aaKnown RBP eCLIP24.4■■□□□ 1.51e-8■■■■■ 31.7
GNAS-235ENST00000478585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.66■■■□□ 2.182e-9■■■■■ 31.7
GNAS-235ENST00000478585 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.07■■□□□ 1.62e-7■■■■■ 30.3
GNAS-235ENST00000478585 DDX3XO00571 662 aaKnown RBP eCLIP26.54■■□□□ 1.844e-21■■■■■ 29
GNAS-235ENST00000478585 PRPF4O43172 522 aaKnown RBP eCLIP25.03■■□□□ 1.66e-9■■■■■ 27.7
GNAS-235ENST00000478585 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.72■■□□□ 1.552e-11■■■■■ 27
GNAS-235ENST00000478585 FXR1P51114 621 aaKnown RBP eCLIP31.07■■■□□ 2.562e-8■■■■□ 26.4
GNAS-235ENST00000478585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.03■■□□□ 1.922e-8■■■■□ 25.1
GNAS-235ENST00000478585 CDC40O60508 579 aaKnown RBP eCLIP24.26■■□□□ 1.478e-9■■■■□ 23.3
GNAS-235ENST00000478585 QKIQ96PU8 341 aaKnown RBP eCLIP25.89■■□□□ 1.741e-8■■■■□ 23
GNAS-235ENST00000478585 YWHAGP61981 247 aaKnown RBP eCLIP27.5■■□□□ 1.992e-6■■■■□ 22.9
GNAS-235ENST00000478585 RBFOX2O43251 390 aaKnown RBP eCLIP20■□□□□ 0.796e-7■■■■□ 21.9
GNAS-235ENST00000478585 EWSR1Q01844 656 aaKnown RBP eCLIP19.24■□□□□ 0.677e-7■■■■□ 21.8
GNAS-235ENST00000478585 SRSF1Q07955 248 aaKnown RBP eCLIP24.94■■□□□ 1.581e-7■■■■□ 21.3
GNAS-235ENST00000478585 AQRO60306 1485 aaKnown RBP eCLIP46.88■■■■■ 5.095e-9■■■■□ 20.8
GNAS-235ENST00000478585 SFPQP23246 707 aaKnown RBP eCLIP29.36■■■□□ 2.295e-7■■■■□ 20.8
GNAS-235ENST00000478585 PUM1Q14671 1186 aaKnown RBP eCLIP27.71■■■□□ 2.036e-9■■■■□ 20.6
GNAS-235ENST00000478585 SF3B4Q15427 424 aaKnown RBP eCLIP24.02■■□□□ 1.441e-7■■■■□ 20.5
GNAS-235ENST00000478585 HNRNPKP61978 463 aaKnown RBP eCLIP26.55■■□□□ 1.846e-7■■■■□ 20.3
GNAS-235ENST00000478585 PCBP1Q15365 356 aaKnown RBP eCLIP29.25■■■□□ 2.271e-36■■■■□ 20
GNAS-235ENST00000478585 FUSP35637 526 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■■□□ 19.1
GNAS-235ENST00000478585 GPKOWQ92917 476 aaPredicted RBP eCLIP30.13■■■□□ 2.412e-7■■■□□ 19.1
GNAS-235ENST00000478585 FTOQ9C0B1 505 aaKnown RBP eCLIP30.13■■■□□ 2.419e-7■■■□□ 18.4
GNAS-235ENST00000478585 EFTUD2Q15029 972 aaKnown RBP eCLIP24.5■■□□□ 1.519e-9■■■□□ 18.1
GNAS-235ENST00000478585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.33■■□□□ 1.494e-25■■■□□ 18.1
GNAS-235ENST00000478585 TROVE2P10155 538 aaKnown RBP eCLIP22.79■■□□□ 1.242e-7■■■□□ 18
GNAS-235ENST00000478585 SF3A3Q12874 501 aaKnown RBP eCLIP22.59■■□□□ 1.213e-9■■■□□ 17.9
GNAS-235ENST00000478585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.18■■□□□ 1.941e-7■■■□□ 17.6
GNAS-235ENST00000478585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.41■■■■■ 4.064e-16■■■□□ 16.9
GNAS-235ENST00000478585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.31■■□□□ 1.162e-10■■■□□ 16.8
GNAS-235ENST00000478585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.74■■■■■ 4.433e-7■■■□□ 16.6
GNAS-235ENST00000478585 XRCC6P12956 609 aaKnown RBP eCLIP29.22■■■□□ 2.274e-10■■■□□ 16.4
GNAS-235ENST00000478585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.48■■□□□ 1.831e-6■■■□□ 16.3
GNAS-235ENST00000478585 SMNDC1O75940 238 aaKnown RBP eCLIP23.59■■□□□ 1.374e-7■■■□□ 16.1
GNAS-235ENST00000478585 HNRNPLP14866 589 aaKnown RBP eCLIP27.45■■□□□ 1.982e-7■■■□□ 15.9
GNAS-235ENST00000478585 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24■■□□□ 1.432e-7■■■□□ 15.7
GNAS-235ENST00000478585 RPS3P23396 243 aaKnown RBP eCLIP25.3■■□□□ 1.645e-46■■■□□ 15.1
GNAS-235ENST00000478585 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.59■■□□□ 1.531e-8■■■□□ 14.8
GNAS-235ENST00000478585 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.54■■□□□ 1.048e-8■■■□□ 14.7
GNAS-235ENST00000478585 HNRNPCP07910 306 aaKnown RBP eCLIP19.23■□□□□ 0.672e-9■■□□□ 14.1
GNAS-235ENST00000478585 UPF1Q92900 1129 aaKnown RBP eCLIP37.82■■■■□ 3.648e-9■■□□□ 14
GNAS-235ENST00000478585 HNRNPMP52272 730 aaKnown RBP eCLIP41.71■■■■■ 4.272e-13■■□□□ 13.8
GNAS-235ENST00000478585 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.39■■■□□ 2.464e-7■■□□□ 13.8
GNAS-235ENST00000478585 SAFB2Q14151 953 aaKnown RBP eCLIP38.14■■■■□ 3.74e-7■■□□□ 12.5
GNAS-235ENST00000478585 TARDBPQ13148 414 aaKnown RBP eCLIP26.46■■□□□ 1.831e-12■■□□□ 12.4
GNAS-235ENST00000478585 G3BP1Q13283 466 aaKnown RBP eCLIP32.41■■■□□ 2.788e-10■■□□□ 12.3
GNAS-235ENST00000478585 NKRFO15226 690 aaKnown RBP eCLIP30.56■■■□□ 2.482e-10■■□□□ 12.2
GNAS-235ENST00000478585 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.31■□□□□ 0.845e-6■■□□□ 12.2
GNAS-235ENST00000478585 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.58■■□□□ 1.536e-7■■□□□ 11.7
GNAS-235ENST00000478585 TIA1P31483 386 aaKnown RBP eCLIP23.99■■□□□ 1.431e-18■■□□□ 11.5
GNAS-235ENST00000478585 WRNQ14191 1432 aaPredicted RBP eCLIP46.32■■■■■ 5.014e-6■■□□□ 11.4
GNAS-235ENST00000478585 U2AF2P26368 475 aaKnown RBP eCLIP29.1■■■□□ 2.251e-36■□□□□ 11.3
GNAS-235ENST00000478585 RBM22Q9NW64 420 aaKnown RBP eCLIP26.2■■□□□ 1.781e-8■□□□□ 11.2
GNAS-235ENST00000478585 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.52■■□□□ 1.687e-7■□□□□ 11.1
GNAS-235ENST00000478585 RBM5P52756 815 aaKnown RBP eCLIP32.75■■■□□ 2.838e-8■□□□□ 11.1
GNAS-235ENST00000478585 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.1■■□□□ 1.133e-6■□□□□ 11
GNAS-235ENST00000478585 DDX6P26196 483 aaKnown RBP eCLIP28.12■■■□□ 2.092e-9■□□□□ 10.7
GNAS-235ENST00000478585 YBX3P16989 372 aaKnown RBP eCLIP35.09■■■■□ 3.212e-7■□□□□ 10.4
GNAS-235ENST00000478585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.02■■■□□ 2.727e-6■□□□□ 9.9
GNAS-235ENST00000478585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.42■■■■■ 4.064e-8■□□□□ 9.9
GNAS-235ENST00000478585 DDX21Q9NR30 783 aaKnown RBP eCLIP34.15■■■■□ 3.065e-6■□□□□ 9.8
GNAS-235ENST00000478585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.01■■■□□ 2.551e-13■□□□□ 9.5
GNAS-235ENST00000478585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.82■■■□□ 2.362e-6■□□□□ 9.5
GNAS-235ENST00000478585 METAP2P50579 478 aaKnown RBP eCLIP30■■■□□ 2.395e-8■□□□□ 9.4
GNAS-235ENST00000478585 PPIGQ13427 754 aaKnown RBP eCLIP30.48■■■□□ 2.474e-21■□□□□ 9.2
GNAS-235ENST00000478585 FXR2P51116 673 aaKnown RBP eCLIP29.07■■■□□ 2.249e-11■□□□□ 9
GNAS-235ENST00000478585 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.73■■■□□ 2.676e-7■□□□□ 8.8
GNAS-235ENST00000478585 HNRNPUQ00839 825 aaKnown RBP eCLIP32.61■■■□□ 2.812e-8■□□□□ 8.8
GNAS-235ENST00000478585 SUB1P53999 127 aaKnown RBP eCLIP19.53■□□□□ 0.726e-13■□□□□ 8.8
GNAS-235ENST00000478585 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.27■■□□□ 1.962e-6■□□□□ 8.6
GNAS-235ENST00000478585 DDX42Q86XP3 938 aaKnown RBP eCLIP27.82■■■□□ 2.042e-6■□□□□ 8.3
GNAS-235ENST00000478585 FMR1Q06787 632 aaKnown RBP eCLIP33.25■■■□□ 2.918e-7■□□□□ 8.2
Retrieved 80 of 80 RNA–protein pairs in 11.5 ms