RNA–Protein interactions for RNA: ENST00000478508.1

NOP58-206, Transcript of NOP58 ribonucleoprotein, humanhuman

TSL 2

Gene NOP58, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP58-206ENST00000478508 PUM1Q14671 1186 aaKnown RBP eCLIP6.05□□□□□ -1.446e-35■■□□□ 14.3
NOP58-206ENST00000478508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.025e-27■■□□□ 11.5
NOP58-206ENST00000478508 TRA2AQ13595 282 aaKnown RBP eCLIP2.78□□□□□ -1.962e-15■■■■■ 86
NOP58-206ENST00000478508 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.03□□□□□ -1.449e-14■■■□□ 16.4
NOP58-206ENST00000478508 GPKOWQ92917 476 aaPredicted RBP eCLIP8.92□□□□□ -0.981e-12■□□□□ 8.3
NOP58-206ENST00000478508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.02□□□□□ -1.931e-12■■■■■ 66.2
NOP58-206ENST00000478508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.229e-12■■□□□ 13.3
NOP58-206ENST00000478508 AQRO60306 1485 aaKnown RBP eCLIP-0.26□□□□□ -2.453e-11■■□□□ 14.5
NOP58-206ENST00000478508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.515e-11■■■■■ 27.3
NOP58-206ENST00000478508 SF3B4Q15427 424 aaKnown RBP eCLIP3.8□□□□□ -1.81e-10■■■■■ 36
NOP58-206ENST00000478508 LARP4Q71RC2 724 aaKnown RBP eCLIP5.67□□□□□ -1.54e-10■□□□□ 8.9
NOP58-206ENST00000478508 ZNF622Q969S3 477 aaKnown RBP eCLIP2.75□□□□□ -1.975e-10■■■■□ 24.8
NOP58-206ENST00000478508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.14□□□□□ -2.435e-9■■■■■ 30.7
NOP58-206ENST00000478508 SF3B1O75533 1304 aaKnown RBP eCLIP1.22□□□□□ -2.219e-9■■■■■ 62.4
NOP58-206ENST00000478508 CPSF6Q16630 551 aaKnown RBP eCLIP7.23□□□□□ -1.251e-8■■■■□ 22.4
NOP58-206ENST00000478508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.211e-8■■■□□ 15.5
NOP58-206ENST00000478508 U2AF2P26368 475 aaKnown RBP eCLIP0.8□□□□□ -2.281e-8■□□□□ 10.6
NOP58-206ENST00000478508 EFTUD2Q15029 972 aaKnown RBP eCLIP2.81□□□□□ -1.963e-8■■■■□ 19.4
NOP58-206ENST00000478508 AGGF1Q8N302 714 aaeCLIP7.5□□□□□ -1.213e-8■□□□□ 9
NOP58-206ENST00000478508 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.126e-8■■■□□ 16.6
NOP58-206ENST00000478508 SF3A3Q12874 501 aaKnown RBP eCLIP3.99□□□□□ -1.772e-7■■■■■ 49.4
NOP58-206ENST00000478508 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.666e-7■□□□□ 10.9
NOP58-206ENST00000478508 HNRNPLP14866 589 aaKnown RBP eCLIP5.46□□□□□ -1.548e-7■■□□□ 14.5
NOP58-206ENST00000478508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.16□□□□□ -1.742e-6■□□□□ 10.2
NOP58-206ENST00000478508 PTBP1P26599 531 aaKnown RBP eCLIP2.1□□□□□ -2.072e-6■□□□□ 10.7
NOP58-206ENST00000478508 TROVE2P10155 538 aaKnown RBP eCLIP0.55□□□□□ -2.324e-6■□□□□ 9.4
NOP58-206ENST00000478508 METAP2P50579 478 aaKnown RBP eCLIP3.51□□□□□ -1.855e-6■□□□□ 9.7
Retrieved 27 of 27 RNA–protein pairs in 7.4 ms