RNA–Protein interactions for RNA: ENST00000478168.1

NSFL1C-207, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-207ENST00000478168 NISCHQ9Y2I1 1504 aa52.37■■■■■ 5.97
NSFL1C-207ENST00000478168 ABCC9O60706 1549 aa47.01■■■■■ 5.12
NSFL1C-207ENST00000478168 CCDC180Q9P1Z9 1646 aa46.8■■■■■ 5.08
NSFL1C-207ENST00000478168 RB1CC1Q8TDY2 1594 aa44.62■■■■■ 4.73
NSFL1C-207ENST00000478168 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
NSFL1C-207ENST00000478168 NACADO15069 1562 aa44.32■■■■■ 4.69
NSFL1C-207ENST00000478168 DNAJC5BQ9UF47 199 aa44.16■■■■■ 4.66
NSFL1C-207ENST00000478168 PABPN1Q86U42 306 aaKnown RBP eCLIP43.91■■■■■ 4.62
NSFL1C-207ENST00000478168 MYO15BQ96JP2 1530 aa43.65■■■■■ 4.58
NSFL1C-207ENST00000478168 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
NSFL1C-207ENST00000478168 ZCCHC6Q5VYS8 1495 aaKnown RBP43.36■■■■■ 4.53
NSFL1C-207ENST00000478168 BICRAQ9NZM4 1560 aa43.35■■■■■ 4.53
NSFL1C-207ENST00000478168 DCAF1Q9Y4B6 1507 aa43.15■■■■■ 4.5
NSFL1C-207ENST00000478168 SCRIBQ14160 1630 aa42.83■■■■■ 4.45
NSFL1C-207ENST00000478168 SHROOM4Q9ULL8 1493 aa42.61■■■■■ 4.41
NSFL1C-207ENST00000478168 CC2D2AQ9P2K1 1620 aa42.38■■■■■ 4.37
NSFL1C-207ENST00000478168 CECR2Q9BXF3 1484 aa42.3■■■■■ 4.36
NSFL1C-207ENST00000478168 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
NSFL1C-207ENST00000478168 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
NSFL1C-207ENST00000478168 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.13
NSFL1C-207ENST00000478168 SMARCA4P51532 1647 aa40.79■■■■■ 4.12
NSFL1C-207ENST00000478168 SMARCA2P51531 1590 aa40.69■■■■■ 4.11
NSFL1C-207ENST00000478168 BAZ1AQ9NRL2 1556 aaPredicted RBP40.6■■■■■ 4.09
NSFL1C-207ENST00000478168 HMGXB3Q12766 1538 aa40.58■■■■■ 4.09
NSFL1C-207ENST00000478168 ERCC6Q03468 1493 aa40.55■■■■■ 4.08
NSFL1C-207ENST00000478168 BAZ1BQ9UIG0 1483 aaKnown RBP40.48■■■■■ 4.07
NSFL1C-207ENST00000478168 DNAJC5Q9H3Z4 198 aa40.42■■■■■ 4.06
NSFL1C-207ENST00000478168 MROH2BQ7Z745 1585 aa40.4■■■■■ 4.06
NSFL1C-207ENST00000478168 NESP48681 1621 aa40.4■■■■■ 4.06
NSFL1C-207ENST00000478168 CUX2O14529 1486 aa40.34■■■■■ 4.05
NSFL1C-207ENST00000478168 PEG3Q9GZU2 1588 aa40.33■■■■■ 4.05
NSFL1C-207ENST00000478168 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
NSFL1C-207ENST00000478168 WIZO95785 1651 aa39.9■■■■□ 3.98
NSFL1C-207ENST00000478168 PDS5BQ9NTI5 1447 aa39.83■■■■□ 3.97
NSFL1C-207ENST00000478168 THOC2Q8NI27 1593 aaKnown RBP39.81■■■■□ 3.96
NSFL1C-207ENST00000478168 CADPSQ9ULU8 1353 aa39.79■■■■□ 3.96
NSFL1C-207ENST00000478168 KIF21AQ7Z4S6 1674 aa39.76■■■■□ 3.96
NSFL1C-207ENST00000478168 RSF1Q96T23 1441 aaPredicted RBP39.6■■■■□ 3.93
NSFL1C-207ENST00000478168 MRC2Q9UBG0 1479 aa39.45■■■■□ 3.91
NSFL1C-207ENST00000478168 TOP2AP11388 1531 aaKnown RBP39.34■■■■□ 3.89
NSFL1C-207ENST00000478168 FANCD2Q9BXW9 1451 aa39.31■■■■□ 3.88
NSFL1C-207ENST00000478168 CEP164Q9UPV0 1460 aa39.31■■■■□ 3.88
NSFL1C-207ENST00000478168 WDR62O43379 1518 aa39.3■■■■□ 3.88
NSFL1C-207ENST00000478168 CFTRP13569 1480 aa39.3■■■■□ 3.88
NSFL1C-207ENST00000478168 CCDC88BA6NC98 1476 aa39■■■■□ 3.83
NSFL1C-207ENST00000478168 URB2Q14146 1524 aaKnown RBP38.99■■■■□ 3.83
NSFL1C-207ENST00000478168 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
NSFL1C-207ENST00000478168 PRDM2Q13029 1718 aa38.75■■■■□ 3.79
NSFL1C-207ENST00000478168 OSCARQ8IYS5 282 aa38.7■■■■□ 3.79
NSFL1C-207ENST00000478168 TOPBP1Q92547 1522 aa38.56■■■■□ 3.76
NSFL1C-207ENST00000478168 ZNF608Q9ULD9 1512 aaPredicted RBP38.54■■■■□ 3.76
NSFL1C-207ENST00000478168 IFT140Q96RY7 1462 aa38.54■■■■□ 3.76
NSFL1C-207ENST00000478168 ABCC8Q09428 1581 aa38.44■■■■□ 3.74
NSFL1C-207ENST00000478168 DNMBPQ6XZF7 1577 aa38.37■■■■□ 3.73
NSFL1C-207ENST00000478168 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.712e-7■■□□□ 14.2
NSFL1C-207ENST00000478168 EIF4G3O43432 1585 aaKnown RBP38.21■■■■□ 3.71
NSFL1C-207ENST00000478168 POLA1P09884 1462 aaPredicted RBP38.17■■■■□ 3.7
NSFL1C-207ENST00000478168 TARBP1Q13395 1621 aaKnown RBP38.17■■■■□ 3.7
NSFL1C-207ENST00000478168 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
NSFL1C-207ENST00000478168 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
NSFL1C-207ENST00000478168 FBLN2P98095 1184 aa38.09■■■■□ 3.69
NSFL1C-207ENST00000478168 SOGA1O94964 1423 aa38.08■■■■□ 3.69
NSFL1C-207ENST00000478168 RIMBP3CA6NJZ7 1639 aa38.05■■■■□ 3.68
NSFL1C-207ENST00000478168 RIMBP3BA6NNM3 1639 aa38.05■■■■□ 3.68
NSFL1C-207ENST00000478168 RIMBP3Q9UFD9 1639 aa38.05■■■■□ 3.68
NSFL1C-207ENST00000478168 TDRD9Q8NDG6 1382 aaKnown RBP38.05■■■■□ 3.68
NSFL1C-207ENST00000478168 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
NSFL1C-207ENST00000478168 ARHGEF11O15085 1522 aa37.95■■■■□ 3.67
NSFL1C-207ENST00000478168 CUX1P39880 1505 aa37.93■■■■□ 3.66
NSFL1C-207ENST00000478168 CHD1O14646 1710 aa37.92■■■■□ 3.66
NSFL1C-207ENST00000478168 CYB5RLQ6IPT4 315 aa37.86■■■■□ 3.65
NSFL1C-207ENST00000478168 SNAPC4Q5SXM2 1469 aa37.77■■■■□ 3.64
NSFL1C-207ENST00000478168 CHMP7Q8WUX9 453 aaPredicted RBP37.75■■■■□ 3.63
NSFL1C-207ENST00000478168 GRIN2BQ13224 1484 aa37.67■■■■□ 3.62
NSFL1C-207ENST00000478168 WDR97A6NE52 1622 aa37.66■■■■□ 3.62
NSFL1C-207ENST00000478168 MAGI1Q96QZ7 1491 aaPredicted RBP37.61■■■■□ 3.61
NSFL1C-207ENST00000478168 ARAP1Q96P48 1450 aa37.59■■■■□ 3.61
NSFL1C-207ENST00000478168 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
NSFL1C-207ENST00000478168 SYNJ2O15056 1496 aa37.52■■■■□ 3.6
NSFL1C-207ENST00000478168 ABCA10Q8WWZ4 1543 aa37.49■■■■□ 3.59
NSFL1C-207ENST00000478168 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
NSFL1C-207ENST00000478168 CLASP1Q7Z460 1538 aa37.48■■■■□ 3.59
NSFL1C-207ENST00000478168 PBRM1Q86U86 1689 aa37.44■■■■□ 3.58
NSFL1C-207ENST00000478168 TRHP20396 242 aaPredicted RBP37.43■■■■□ 3.58
NSFL1C-207ENST00000478168 WRNQ14191 1432 aaPredicted RBP eCLIP37.4■■■■□ 3.58
NSFL1C-207ENST00000478168 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
NSFL1C-207ENST00000478168 TOP2BQ02880 1626 aa37.28■■■■□ 3.56
NSFL1C-207ENST00000478168 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
NSFL1C-207ENST00000478168 GRIN2AQ12879 1464 aa37.17■■■■□ 3.54
NSFL1C-207ENST00000478168 ADAMTS12P58397 1594 aa37.1■■■■□ 3.53
NSFL1C-207ENST00000478168 FHAD1B1AJZ9 1412 aa37.08■■■■□ 3.53
NSFL1C-207ENST00000478168 CEP170Q5SW79 1584 aa37.03■■■■□ 3.52
NSFL1C-207ENST00000478168 NUP160Q12769 1436 aa37.02■■■■□ 3.52
NSFL1C-207ENST00000478168 ERCC6L2Q5T890 1561 aa37.01■■■■□ 3.52
NSFL1C-207ENST00000478168 ERICH3Q5RHP9 1530 aa36.99■■■■□ 3.51
NSFL1C-207ENST00000478168 JPH4Q96JJ6 628 aa36.81■■■■□ 3.48
NSFL1C-207ENST00000478168 SHROOM2Q13796 1616 aa36.79■■■■□ 3.48
NSFL1C-207ENST00000478168 PRG4Q92954 1404 aaPredicted RBP36.76■■■■□ 3.48
NSFL1C-207ENST00000478168 IGF1RP08069 1367 aa36.68■■■■□ 3.46
NSFL1C-207ENST00000478168 KIF27Q86VH2 1401 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms