RNA–Protein interactions for RNA: ENST00000478034.5

P4HB-212, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-212ENST00000478034 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
P4HB-212ENST00000478034 ABCC9O60706 1549 aa33.1■■■□□ 2.89
P4HB-212ENST00000478034 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
P4HB-212ENST00000478034 DNAJC5BQ9UF47 199 aa31.45■■■□□ 2.63
P4HB-212ENST00000478034 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
P4HB-212ENST00000478034 NACADO15069 1562 aa31.12■■■□□ 2.57
P4HB-212ENST00000478034 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
P4HB-212ENST00000478034 PABPN1Q86U42 306 aaKnown RBP eCLIP30.83■■■□□ 2.53
P4HB-212ENST00000478034 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
P4HB-212ENST00000478034 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
P4HB-212ENST00000478034 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
P4HB-212ENST00000478034 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
P4HB-212ENST00000478034 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
P4HB-212ENST00000478034 ZCCHC6Q5VYS8 1495 aaKnown RBP30.03■■■□□ 2.4
P4HB-212ENST00000478034 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
P4HB-212ENST00000478034 CC2D2AQ9P2K1 1620 aa29.86■■■□□ 2.37
P4HB-212ENST00000478034 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
P4HB-212ENST00000478034 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
P4HB-212ENST00000478034 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
P4HB-212ENST00000478034 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
P4HB-212ENST00000478034 CUX2O14529 1486 aa28.76■■■□□ 2.19
P4HB-212ENST00000478034 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
P4HB-212ENST00000478034 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
P4HB-212ENST00000478034 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
P4HB-212ENST00000478034 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
P4HB-212ENST00000478034 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
P4HB-212ENST00000478034 NESP48681 1621 aa28.3■■■□□ 2.12
P4HB-212ENST00000478034 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
P4HB-212ENST00000478034 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
P4HB-212ENST00000478034 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
P4HB-212ENST00000478034 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
P4HB-212ENST00000478034 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
P4HB-212ENST00000478034 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
P4HB-212ENST00000478034 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
P4HB-212ENST00000478034 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
P4HB-212ENST00000478034 KIF21AQ7Z4S6 1674 aa27.85■■■□□ 2.05
P4HB-212ENST00000478034 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
P4HB-212ENST00000478034 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
P4HB-212ENST00000478034 WDR62O43379 1518 aa27.66■■■□□ 2.02
P4HB-212ENST00000478034 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
P4HB-212ENST00000478034 WIZO95785 1651 aa27.56■■■□□ 2
P4HB-212ENST00000478034 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
P4HB-212ENST00000478034 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
P4HB-212ENST00000478034 CFTRP13569 1480 aa27.46■■□□□ 1.99
P4HB-212ENST00000478034 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.96
P4HB-212ENST00000478034 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
P4HB-212ENST00000478034 TOP2AP11388 1531 aaKnown RBP27.25■■□□□ 1.95
P4HB-212ENST00000478034 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
P4HB-212ENST00000478034 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
P4HB-212ENST00000478034 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
P4HB-212ENST00000478034 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
P4HB-212ENST00000478034 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
P4HB-212ENST00000478034 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.91
P4HB-212ENST00000478034 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.91
P4HB-212ENST00000478034 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.91
P4HB-212ENST00000478034 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
P4HB-212ENST00000478034 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
P4HB-212ENST00000478034 CYB5RLQ6IPT4 315 aa26.83■■□□□ 1.89
P4HB-212ENST00000478034 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
P4HB-212ENST00000478034 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
P4HB-212ENST00000478034 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.875e-7■■■□□ 15.9
P4HB-212ENST00000478034 FBLN2P98095 1184 aa26.71■■□□□ 1.87
P4HB-212ENST00000478034 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
P4HB-212ENST00000478034 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
P4HB-212ENST00000478034 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
P4HB-212ENST00000478034 SOGA1O94964 1423 aa26.58■■□□□ 1.85
P4HB-212ENST00000478034 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
P4HB-212ENST00000478034 CHD1O14646 1710 aa26.58■■□□□ 1.85
P4HB-212ENST00000478034 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
P4HB-212ENST00000478034 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
P4HB-212ENST00000478034 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
P4HB-212ENST00000478034 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
P4HB-212ENST00000478034 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
P4HB-212ENST00000478034 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
P4HB-212ENST00000478034 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
P4HB-212ENST00000478034 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
P4HB-212ENST00000478034 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
P4HB-212ENST00000478034 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
P4HB-212ENST00000478034 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
P4HB-212ENST00000478034 CUX1P39880 1505 aa26.29■■□□□ 1.8
P4HB-212ENST00000478034 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
P4HB-212ENST00000478034 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
P4HB-212ENST00000478034 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
P4HB-212ENST00000478034 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
P4HB-212ENST00000478034 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
P4HB-212ENST00000478034 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
P4HB-212ENST00000478034 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
P4HB-212ENST00000478034 NUP160Q12769 1436 aa25.94■■□□□ 1.74
P4HB-212ENST00000478034 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
P4HB-212ENST00000478034 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
P4HB-212ENST00000478034 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
P4HB-212ENST00000478034 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
P4HB-212ENST00000478034 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
P4HB-212ENST00000478034 ERICH3Q5RHP9 1530 aa25.79■■□□□ 1.72
P4HB-212ENST00000478034 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
P4HB-212ENST00000478034 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
P4HB-212ENST00000478034 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
P4HB-212ENST00000478034 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
P4HB-212ENST00000478034 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
P4HB-212ENST00000478034 NPM1P06748 294 aaKnown RBP eCLIP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms