RNA–Protein interactions for RNA: ENST00000477931.5

GNAS-234, Transcript of GNAS complex locus, humanhuman

TSL 1 (best)

Gene GNAS, Length 1,663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-234ENST00000477931 TRA2AQ13595 282 aaKnown RBP eCLIP22.77■■□□□ 1.247e-17■■■■■ 73.3
GNAS-234ENST00000477931 GTF2F1P35269 517 aaKnown RBP eCLIP25.29■■□□□ 1.642e-9■■■■■ 69.5
GNAS-234ENST00000477931 AGGF1Q8N302 714 aaeCLIP23.44■■□□□ 1.343e-8■■■■■ 55.1
GNAS-234ENST00000477931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.39■■□□□ 1.654e-6■■■■■ 41.6
GNAS-234ENST00000477931 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.93■■□□□ 1.92e-7■■■■■ 41
GNAS-234ENST00000477931 SF3B1O75533 1304 aaKnown RBP eCLIP25.42■■□□□ 1.661e-6■■■■■ 35.8
GNAS-234ENST00000477931 NCBP2P52298 156 aaKnown RBP eCLIP21.98■■□□□ 1.113e-11■■■■■ 33.2
GNAS-234ENST00000477931 NONOQ15233 471 aaKnown RBP eCLIP26.9■■□□□ 1.96e-7■■■■■ 32.8
GNAS-234ENST00000477931 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.83■■□□□ 1.572e-9■■■■■ 31.7
GNAS-234ENST00000477931 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.3■■□□□ 1.322e-7■■■■■ 30.3
GNAS-234ENST00000477931 PCBP2Q15366 365 aaKnown RBP eCLIP22.62■■□□□ 1.217e-9■■■■■ 29.2
GNAS-234ENST00000477931 DDX3XO00571 662 aaKnown RBP eCLIP24.76■■□□□ 1.554e-21■■■■■ 29
GNAS-234ENST00000477931 PRPF4O43172 522 aaKnown RBP eCLIP22.54■■□□□ 1.26e-9■■■■■ 27.7
GNAS-234ENST00000477931 SF3B4Q15427 424 aaKnown RBP eCLIP21.15■□□□□ 0.989e-8■■■■■ 27.2
GNAS-234ENST00000477931 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.78■■□□□ 1.082e-11■■■■■ 27
GNAS-234ENST00000477931 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.62■■□□□ 1.532e-8■■■■□ 25.1
GNAS-234ENST00000477931 RBM22Q9NW64 420 aaKnown RBP eCLIP23.95■■□□□ 1.422e-6■■■■□ 24.6
GNAS-234ENST00000477931 SF3A3Q12874 501 aaKnown RBP eCLIP22.06■■□□□ 1.128e-7■■■■□ 24.2
GNAS-234ENST00000477931 CDC40O60508 579 aaKnown RBP eCLIP21.46■■□□□ 1.038e-9■■■■□ 23.3
GNAS-234ENST00000477931 FXR1P51114 621 aaKnown RBP eCLIP25.55■■□□□ 1.686e-7■■■■□ 23.2
GNAS-234ENST00000477931 YWHAGP61981 247 aaKnown RBP eCLIP24.76■■□□□ 1.552e-6■■■■□ 22.9
GNAS-234ENST00000477931 QKIQ96PU8 341 aaKnown RBP eCLIP23.92■■□□□ 1.422e-8■■■■□ 22.2
GNAS-234ENST00000477931 RBFOX2O43251 390 aaKnown RBP eCLIP18.66■□□□□ 0.586e-7■■■■□ 21.9
GNAS-234ENST00000477931 EWSR1Q01844 656 aaKnown RBP eCLIP17.92■□□□□ 0.467e-7■■■■□ 21.8
GNAS-234ENST00000477931 AQRO60306 1485 aaKnown RBP eCLIP40.08■■■■■ 4.016e-9■■■■□ 21.8
GNAS-234ENST00000477931 SRSF1Q07955 248 aaKnown RBP eCLIP21.12■□□□□ 0.971e-7■■■■□ 21.3
GNAS-234ENST00000477931 SFPQP23246 707 aaKnown RBP eCLIP26.02■■□□□ 1.765e-7■■■■□ 20.8
GNAS-234ENST00000477931 HNRNPKP61978 463 aaKnown RBP eCLIP23.32■■□□□ 1.326e-7■■■■□ 20.3
GNAS-234ENST00000477931 PCBP1Q15365 356 aaKnown RBP eCLIP25.95■■□□□ 1.741e-36■■■■□ 20
GNAS-234ENST00000477931 FUSP35637 526 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■■□□ 19.1
GNAS-234ENST00000477931 GPKOWQ92917 476 aaPredicted RBP eCLIP27.26■■□□□ 1.952e-7■■■□□ 19.1
GNAS-234ENST00000477931 PABPC4Q13310 644 aaKnown RBP eCLIP27.66■■■□□ 2.022e-20■■■□□ 19.1
GNAS-234ENST00000477931 FTOQ9C0B1 505 aaKnown RBP eCLIP26.63■■□□□ 1.859e-7■■■□□ 18.4
GNAS-234ENST00000477931 EFTUD2Q15029 972 aaKnown RBP eCLIP23.12■■□□□ 1.299e-9■■■□□ 18.1
GNAS-234ENST00000477931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.88■■□□□ 1.094e-25■■■□□ 18.1
GNAS-234ENST00000477931 TROVE2P10155 538 aaKnown RBP eCLIP22.01■■□□□ 1.112e-7■■■□□ 18
GNAS-234ENST00000477931 PUM1Q14671 1186 aaKnown RBP eCLIP23.01■■□□□ 1.274e-9■■■□□ 17.7
GNAS-234ENST00000477931 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.52■■□□□ 1.521e-7■■■□□ 17.6
GNAS-234ENST00000477931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.99■■■■□ 3.354e-16■■■□□ 16.9
GNAS-234ENST00000477931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.01■■■■□ 3.513e-7■■■□□ 16.6
GNAS-234ENST00000477931 XRCC6P12956 609 aaKnown RBP eCLIP26.34■■□□□ 1.814e-10■■■□□ 16.4
GNAS-234ENST00000477931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.64■□□□□ 0.743e-10■■■□□ 16.3
GNAS-234ENST00000477931 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.75■■□□□ 1.551e-6■■■□□ 16.3
GNAS-234ENST00000477931 SMNDC1O75940 238 aaKnown RBP eCLIP20.96■□□□□ 0.954e-7■■■□□ 16.1
GNAS-234ENST00000477931 HNRNPLP14866 589 aaKnown RBP eCLIP24.15■■□□□ 1.462e-7■■■□□ 15.9
GNAS-234ENST00000477931 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.09■■□□□ 1.292e-7■■■□□ 15.7
GNAS-234ENST00000477931 METAP2P50579 478 aaKnown RBP eCLIP27.44■■□□□ 1.982e-8■■■□□ 15.1
GNAS-234ENST00000477931 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.24■□□□□ 0.995e-9■■■□□ 14.8
GNAS-234ENST00000477931 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.37■□□□□ 0.858e-8■■■□□ 14.7
GNAS-234ENST00000477931 HNRNPCP07910 306 aaKnown RBP eCLIP17.79■□□□□ 0.442e-9■■□□□ 14.1
GNAS-234ENST00000477931 UPF1Q92900 1129 aaKnown RBP eCLIP31.21■■■□□ 2.598e-9■■□□□ 14
GNAS-234ENST00000477931 HNRNPMP52272 730 aaKnown RBP eCLIP36.42■■■■□ 3.422e-13■■□□□ 13.8
GNAS-234ENST00000477931 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.07■■□□□ 1.763e-7■■□□□ 13.5
GNAS-234ENST00000477931 YBX3P16989 372 aaKnown RBP eCLIP29.6■■■□□ 2.336e-8■■□□□ 12.7
GNAS-234ENST00000477931 SAFB2Q14151 953 aaKnown RBP eCLIP33.54■■■□□ 2.964e-7■■□□□ 12.5
GNAS-234ENST00000477931 TARDBPQ13148 414 aaKnown RBP eCLIP22.83■■□□□ 1.241e-12■■□□□ 12.4
GNAS-234ENST00000477931 G3BP1Q13283 466 aaKnown RBP eCLIP29.27■■■□□ 2.288e-10■■□□□ 12.3
GNAS-234ENST00000477931 NKRFO15226 690 aaKnown RBP eCLIP26.78■■□□□ 1.882e-10■■□□□ 12.2
GNAS-234ENST00000477931 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.24■□□□□ 0.675e-6■■□□□ 12.2
GNAS-234ENST00000477931 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.24■■□□□ 1.476e-7■■□□□ 11.7
GNAS-234ENST00000477931 TIA1P31483 386 aaKnown RBP eCLIP22.19■■□□□ 1.141e-18■■□□□ 11.5
GNAS-234ENST00000477931 WRNQ14191 1432 aaPredicted RBP eCLIP40.61■■■■■ 4.094e-6■■□□□ 11.4
GNAS-234ENST00000477931 PABPN1Q86U42 306 aaKnown RBP eCLIP45.31■■■■■ 4.841e-59■■□□□ 11.4
GNAS-234ENST00000477931 U2AF2P26368 475 aaKnown RBP eCLIP26.83■■□□□ 1.893e-19■□□□□ 11.3
GNAS-234ENST00000477931 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.29■■□□□ 1.327e-7■□□□□ 11.1
GNAS-234ENST00000477931 RBM5P52756 815 aaKnown RBP eCLIP28.7■■■□□ 2.188e-8■□□□□ 11.1
GNAS-234ENST00000477931 RPS3P23396 243 aaKnown RBP eCLIP23.16■■□□□ 1.35e-14■□□□□ 11
GNAS-234ENST00000477931 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.67■□□□□ 0.91e-6■□□□□ 10.9
GNAS-234ENST00000477931 DDX6P26196 483 aaKnown RBP eCLIP24.75■■□□□ 1.552e-9■□□□□ 10.7
GNAS-234ENST00000477931 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.56■■■□□ 2.162e-7■□□□□ 10.1
GNAS-234ENST00000477931 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.19■■■□□ 2.17e-6■□□□□ 9.9
GNAS-234ENST00000477931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.46■■■■□ 3.274e-8■□□□□ 9.9
GNAS-234ENST00000477931 PPIGQ13427 754 aaKnown RBP eCLIP26.12■■□□□ 1.772e-11■□□□□ 9.8
GNAS-234ENST00000477931 DDX21Q9NR30 783 aaKnown RBP eCLIP30.39■■■□□ 2.455e-6■□□□□ 9.8
GNAS-234ENST00000477931 SUB1P53999 127 aaKnown RBP eCLIP18.21■□□□□ 0.511e-8■□□□□ 9.6
GNAS-234ENST00000477931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.22■■□□□ 1.951e-13■□□□□ 9.5
GNAS-234ENST00000477931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.98■■□□□ 1.752e-6■□□□□ 9.5
GNAS-234ENST00000477931 FXR2P51116 673 aaKnown RBP eCLIP26.52■■□□□ 1.844e-9■□□□□ 9.2
GNAS-234ENST00000477931 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.28■■□□□ 1.643e-6■□□□□ 9.2
GNAS-234ENST00000477931 RBM15Q96T37 977 aaKnown RBP eCLIP23.82■■□□□ 1.43e-11■□□□□ 9.2
GNAS-234ENST00000477931 HNRNPUQ00839 825 aaKnown RBP eCLIP30.76■■■□□ 2.512e-8■□□□□ 8.8
GNAS-234ENST00000477931 SND1Q7KZF4 910 aaKnown RBP eCLIP24.5■■□□□ 1.512e-10■□□□□ 8.7
GNAS-234ENST00000477931 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.24■■□□□ 1.472e-6■□□□□ 8.6
GNAS-234ENST00000477931 DDX42Q86XP3 938 aaKnown RBP eCLIP24.59■■□□□ 1.532e-6■□□□□ 8.3
GNAS-234ENST00000477931 FMR1Q06787 632 aaKnown RBP eCLIP28.48■■■□□ 2.158e-7■□□□□ 8.2
Retrieved 85 of 85 RNA–protein pairs in 17.9 ms