RNA–Protein interactions for RNA: ENST00000477575.1

MMS19-214, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-214ENST00000477575 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
MMS19-214ENST00000477575 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
MMS19-214ENST00000477575 ABCC9O60706 1549 aa25.53■■□□□ 1.68
MMS19-214ENST00000477575 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
MMS19-214ENST00000477575 NACADO15069 1562 aa24.26■■□□□ 1.47
MMS19-214ENST00000477575 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
MMS19-214ENST00000477575 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
MMS19-214ENST00000477575 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
MMS19-214ENST00000477575 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
MMS19-214ENST00000477575 PABPN1Q86U42 306 aaKnown RBP eCLIP23.72■■□□□ 1.39
MMS19-214ENST00000477575 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
MMS19-214ENST00000477575 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
MMS19-214ENST00000477575 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
MMS19-214ENST00000477575 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
MMS19-214ENST00000477575 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
MMS19-214ENST00000477575 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
MMS19-214ENST00000477575 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
MMS19-214ENST00000477575 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
MMS19-214ENST00000477575 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
MMS19-214ENST00000477575 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
MMS19-214ENST00000477575 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
MMS19-214ENST00000477575 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
MMS19-214ENST00000477575 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
MMS19-214ENST00000477575 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
MMS19-214ENST00000477575 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
MMS19-214ENST00000477575 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
MMS19-214ENST00000477575 CUX2O14529 1486 aa22.08■■□□□ 1.12
MMS19-214ENST00000477575 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
MMS19-214ENST00000477575 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
MMS19-214ENST00000477575 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
MMS19-214ENST00000477575 NESP48681 1621 aa21.9■■□□□ 1.1
MMS19-214ENST00000477575 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
MMS19-214ENST00000477575 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
MMS19-214ENST00000477575 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
MMS19-214ENST00000477575 WIZO95785 1651 aa21.7■■□□□ 1.06
MMS19-214ENST00000477575 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
MMS19-214ENST00000477575 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
MMS19-214ENST00000477575 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
MMS19-214ENST00000477575 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
MMS19-214ENST00000477575 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
MMS19-214ENST00000477575 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
MMS19-214ENST00000477575 WDR62O43379 1518 aa21.47■■□□□ 1.03
MMS19-214ENST00000477575 CFTRP13569 1480 aa21.41■■□□□ 1.02
MMS19-214ENST00000477575 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
MMS19-214ENST00000477575 PRDM2Q13029 1718 aa21.32■■□□□ 1
MMS19-214ENST00000477575 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
MMS19-214ENST00000477575 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
MMS19-214ENST00000477575 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
MMS19-214ENST00000477575 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
MMS19-214ENST00000477575 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
MMS19-214ENST00000477575 TOPBP1Q92547 1522 aa21■□□□□ 0.95
MMS19-214ENST00000477575 TRIM41Q8WV44 630 aa21■□□□□ 0.95
MMS19-214ENST00000477575 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
MMS19-214ENST00000477575 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
MMS19-214ENST00000477575 EIF4G3O43432 1585 aaKnown RBP20.87■□□□□ 0.93
MMS19-214ENST00000477575 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
MMS19-214ENST00000477575 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
MMS19-214ENST00000477575 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
MMS19-214ENST00000477575 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
MMS19-214ENST00000477575 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
MMS19-214ENST00000477575 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
MMS19-214ENST00000477575 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.916e-8■■■■■ 26.8
MMS19-214ENST00000477575 CHD1O14646 1710 aa20.73■□□□□ 0.91
MMS19-214ENST00000477575 SOGA1O94964 1423 aa20.7■□□□□ 0.9
MMS19-214ENST00000477575 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
MMS19-214ENST00000477575 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
MMS19-214ENST00000477575 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
MMS19-214ENST00000477575 FBLN2P98095 1184 aa20.65■□□□□ 0.9
MMS19-214ENST00000477575 CUX1P39880 1505 aa20.62■□□□□ 0.89
MMS19-214ENST00000477575 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
MMS19-214ENST00000477575 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
MMS19-214ENST00000477575 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
MMS19-214ENST00000477575 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
MMS19-214ENST00000477575 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
MMS19-214ENST00000477575 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
MMS19-214ENST00000477575 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
MMS19-214ENST00000477575 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
MMS19-214ENST00000477575 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
MMS19-214ENST00000477575 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
MMS19-214ENST00000477575 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
MMS19-214ENST00000477575 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
MMS19-214ENST00000477575 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
MMS19-214ENST00000477575 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
MMS19-214ENST00000477575 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
MMS19-214ENST00000477575 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
MMS19-214ENST00000477575 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
MMS19-214ENST00000477575 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
MMS19-214ENST00000477575 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
MMS19-214ENST00000477575 ADAMTS12P58397 1594 aa20.27■□□□□ 0.84
MMS19-214ENST00000477575 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
MMS19-214ENST00000477575 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
MMS19-214ENST00000477575 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
MMS19-214ENST00000477575 NUP160Q12769 1436 aa20.19■□□□□ 0.82
MMS19-214ENST00000477575 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
MMS19-214ENST00000477575 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
MMS19-214ENST00000477575 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
MMS19-214ENST00000477575 CUL7Q14999 1698 aa19.99■□□□□ 0.79
MMS19-214ENST00000477575 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
MMS19-214ENST00000477575 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
MMS19-214ENST00000477575 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms