RNA–Protein interactions for RNA: ENST00000477030.2

EPRS-204, Transcript of glutamyl-prolyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene EPRS, Length 1,526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPRS-204ENST00000477030 TARDBPQ13148 414 aaKnown RBP eCLIP20.63■□□□□ 0.892e-16■■■■■ 71.2
EPRS-204ENST00000477030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.57■□□□□ 0.42e-12■■■■■ 46.8
EPRS-204ENST00000477030 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.34■□□□□ 0.697e-7■■■■■ 43.5
EPRS-204ENST00000477030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.31■■□□□ 1.322e-9■■■■■ 41.9
EPRS-204ENST00000477030 DDX3XO00571 662 aaKnown RBP eCLIP20.92■□□□□ 0.945e-23■■■■■ 41
EPRS-204ENST00000477030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.85■■□□□ 1.093e-6■■■■■ 34.7
EPRS-204ENST00000477030 EFTUD2Q15029 972 aaKnown RBP eCLIP19.35■□□□□ 0.696e-7■■■■■ 29.5
EPRS-204ENST00000477030 MATR3P43243 847 aaKnown RBP eCLIP22.47■■□□□ 1.191e-7■■■■■ 27.5
EPRS-204ENST00000477030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.1■□□□□ 0.652e-8■■■■■ 27.2
EPRS-204ENST00000477030 FXR2P51116 673 aaKnown RBP eCLIP22.81■■□□□ 1.247e-8■■■■■ 26.9
EPRS-204ENST00000477030 QKIQ96PU8 341 aaKnown RBP eCLIP20.37■□□□□ 0.855e-9■■■■□ 26.4
EPRS-204ENST00000477030 AQRO60306 1485 aaKnown RBP eCLIP36.58■■■■□ 3.451e-6■■■■□ 26.1
EPRS-204ENST00000477030 DDX21Q9NR30 783 aaKnown RBP eCLIP26.72■■□□□ 1.875e-6■■■■□ 24.8
EPRS-204ENST00000477030 FXR1P51114 621 aaKnown RBP eCLIP24.09■■□□□ 1.453e-8■■■■□ 24.1
EPRS-204ENST00000477030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.22■□□□□ 0.992e-6■■■■□ 24
EPRS-204ENST00000477030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.26■□□□□ 0.831e-6■■■■□ 23.9
EPRS-204ENST00000477030 FMR1Q06787 632 aaKnown RBP eCLIP25.98■■□□□ 1.752e-9■■■■□ 23.4
EPRS-204ENST00000477030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.55■□□□□ 0.729e-6■■■■□ 20.1
EPRS-204ENST00000477030 SND1Q7KZF4 910 aaKnown RBP eCLIP21.19■□□□□ 0.983e-8■■■□□ 17.8
EPRS-204ENST00000477030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.99■■■□□ 2.071e-9■■■□□ 16.7
EPRS-204ENST00000477030 ZNF622Q969S3 477 aaKnown RBP eCLIP26.87■■□□□ 1.892e-19■■■□□ 15.9
EPRS-204ENST00000477030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.65■■■□□ 2.662e-7■■■□□ 15.8
EPRS-204ENST00000477030 G3BP1Q13283 466 aaKnown RBP eCLIP25.42■■□□□ 1.669e-7■■■□□ 15.6
EPRS-204ENST00000477030 SUB1P53999 127 aaKnown RBP eCLIP15.34■□□□□ 0.058e-6■■■□□ 15.4
EPRS-204ENST00000477030 KHSRPQ92945 711 aaKnown RBP eCLIP22.7■■□□□ 1.225e-7■■□□□ 14.5
EPRS-204ENST00000477030 SF3B4Q15427 424 aaKnown RBP eCLIP18.7■□□□□ 0.587e-7■■□□□ 13.5
EPRS-204ENST00000477030 RPS3P23396 243 aaKnown RBP eCLIP19.85■□□□□ 0.772e-7■■□□□ 12.8
EPRS-204ENST00000477030 PTBP1P26599 531 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■□□□ 12.6
EPRS-204ENST00000477030 TRA2AQ13595 282 aaKnown RBP eCLIP20.25■□□□□ 0.836e-7■■□□□ 12.5
EPRS-204ENST00000477030 YBX3P16989 372 aaKnown RBP eCLIP27.32■■□□□ 1.969e-8■■□□□ 11.9
EPRS-204ENST00000477030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.8■□□□□ 0.925e-12■□□□□ 11.2
EPRS-204ENST00000477030 NIPBLQ6KC79 2804 aaeCLIP17.99■□□□□ 0.472e-6■□□□□ 11.2
EPRS-204ENST00000477030 HLTFQ14527 1009 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■□□□□ 10.7
EPRS-204ENST00000477030 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.86■■□□□ 1.571e-10■□□□□ 10.7
EPRS-204ENST00000477030 WDR43Q15061 677 aaKnown RBP eCLIP27.08■■□□□ 1.935e-7■□□□□ 10.4
EPRS-204ENST00000477030 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.22e-6■□□□□ 9.7
EPRS-204ENST00000477030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.62■■□□□ 1.058e-13■□□□□ 9.4
EPRS-204ENST00000477030 PUM1Q14671 1186 aaKnown RBP eCLIP21.47■■□□□ 1.037e-14■□□□□ 8.8
EPRS-204ENST00000477030 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■□□□□ 8.4
Retrieved 39 of 39 RNA–protein pairs in 9.3 ms