RNA–Protein interactions for RNA: ENST00000476188.5

SKIL-207, Transcript of SKI like proto-oncogene, humanhuman

TSL 5

Gene SKIL, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-207ENST00000476188 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
SKIL-207ENST00000476188 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
SKIL-207ENST00000476188 ABCC9O60706 1549 aa46.04■■■■■ 4.96
SKIL-207ENST00000476188 RB1CC1Q8TDY2 1594 aa44.32■■■■■ 4.69
SKIL-207ENST00000476188 NACADO15069 1562 aa44.26■■■■■ 4.68
SKIL-207ENST00000476188 MYO15BQ96JP2 1530 aa44.05■■■■■ 4.64
SKIL-207ENST00000476188 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
SKIL-207ENST00000476188 DCAF8L2P0C7V8 631 aa43.87■■■■■ 4.61
SKIL-207ENST00000476188 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
SKIL-207ENST00000476188 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
SKIL-207ENST00000476188 BICRAQ9NZM4 1560 aa42.96■■■■■ 4.47
SKIL-207ENST00000476188 PABPN1Q86U42 306 aaKnown RBP eCLIP42.93■■■■■ 4.46
SKIL-207ENST00000476188 SHROOM4Q9ULL8 1493 aa42.71■■■■■ 4.43
SKIL-207ENST00000476188 SCRIBQ14160 1630 aa42.71■■■■■ 4.43
SKIL-207ENST00000476188 DNAJC5BQ9UF47 199 aa42.45■■■■■ 4.39
SKIL-207ENST00000476188 EIF4G1Q04637 1599 aaKnown RBP41.85■■■■■ 4.29
SKIL-207ENST00000476188 CC2D2AQ9P2K1 1620 aa41.69■■■■■ 4.26
SKIL-207ENST00000476188 CECR2Q9BXF3 1484 aa41.47■■■■■ 4.23
SKIL-207ENST00000476188 SMARCA4P51532 1647 aa40.93■■■■■ 4.14
SKIL-207ENST00000476188 BAZ1AQ9NRL2 1556 aaPredicted RBP40.9■■■■■ 4.14
SKIL-207ENST00000476188 NCAPD3P42695 1498 aa40.86■■■■■ 4.13
SKIL-207ENST00000476188 ATAD2BQ9ULI0 1458 aa40.78■■■■■ 4.12
SKIL-207ENST00000476188 SMARCA2P51531 1590 aa40.76■■■■■ 4.12
SKIL-207ENST00000476188 HMGXB3Q12766 1538 aa40.64■■■■■ 4.1
SKIL-207ENST00000476188 PEG3Q9GZU2 1588 aa40.64■■■■■ 4.1
SKIL-207ENST00000476188 MROH2BQ7Z745 1585 aa40.56■■■■■ 4.08
SKIL-207ENST00000476188 BAZ1BQ9UIG0 1483 aaKnown RBP40.41■■■■■ 4.06
SKIL-207ENST00000476188 RSF1Q96T23 1441 aaPredicted RBP40.06■■■■■ 4
SKIL-207ENST00000476188 WIZO95785 1651 aa40.05■■■■■ 4
SKIL-207ENST00000476188 LAMC3Q9Y6N6 1575 aa39.79■■■■□ 3.96
SKIL-207ENST00000476188 NESP48681 1621 aa39.77■■■■□ 3.96
SKIL-207ENST00000476188 ERCC6Q03468 1493 aa39.75■■■■□ 3.95
SKIL-207ENST00000476188 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
SKIL-207ENST00000476188 CADPSQ9ULU8 1353 aa39.61■■■■□ 3.93
SKIL-207ENST00000476188 CUX2O14529 1486 aa39.54■■■■□ 3.92
SKIL-207ENST00000476188 PDS5BQ9NTI5 1447 aa39.53■■■■□ 3.92
SKIL-207ENST00000476188 CFTRP13569 1480 aa39.35■■■■□ 3.89
SKIL-207ENST00000476188 THOC2Q8NI27 1593 aaKnown RBP39.32■■■■□ 3.88
SKIL-207ENST00000476188 KIF21AQ7Z4S6 1674 aa39.29■■■■□ 3.88
SKIL-207ENST00000476188 CCDC88BA6NC98 1476 aa39.22■■■■□ 3.87
SKIL-207ENST00000476188 FANCD2Q9BXW9 1451 aa39.11■■■■□ 3.85
SKIL-207ENST00000476188 MRC2Q9UBG0 1479 aa39.11■■■■□ 3.85
SKIL-207ENST00000476188 CEP164Q9UPV0 1460 aa39.11■■■■□ 3.85
SKIL-207ENST00000476188 WDR62O43379 1518 aa39.01■■■■□ 3.84
SKIL-207ENST00000476188 PRDM2Q13029 1718 aa38.95■■■■□ 3.83
SKIL-207ENST00000476188 URB2Q14146 1524 aaKnown RBP38.73■■■■□ 3.79
SKIL-207ENST00000476188 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
SKIL-207ENST00000476188 ABCC8Q09428 1581 aa38.55■■■■□ 3.76
SKIL-207ENST00000476188 DNAJC5Q9H3Z4 198 aa38.51■■■■□ 3.76
SKIL-207ENST00000476188 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
SKIL-207ENST00000476188 DNMBPQ6XZF7 1577 aa38.43■■■■□ 3.74
SKIL-207ENST00000476188 IFT140Q96RY7 1462 aa38.34■■■■□ 3.73
SKIL-207ENST00000476188 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
SKIL-207ENST00000476188 TARBP1Q13395 1621 aaKnown RBP38.08■■■■□ 3.69
SKIL-207ENST00000476188 CUX1P39880 1505 aa38.07■■■■□ 3.69
SKIL-207ENST00000476188 ZNF608Q9ULD9 1512 aaPredicted RBP38.07■■■■□ 3.69
SKIL-207ENST00000476188 FGD5Q6ZNL6 1462 aa37.98■■■■□ 3.67
SKIL-207ENST00000476188 SOGA1O94964 1423 aa37.95■■■■□ 3.67
SKIL-207ENST00000476188 EIF4G3O43432 1585 aaKnown RBP37.95■■■■□ 3.67
SKIL-207ENST00000476188 WDR97A6NE52 1622 aa37.9■■■■□ 3.66
SKIL-207ENST00000476188 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
SKIL-207ENST00000476188 AQRO60306 1485 aaKnown RBP eCLIP37.82■■■■□ 3.64
SKIL-207ENST00000476188 WRNQ14191 1432 aaPredicted RBP eCLIP37.78■■■■□ 3.64
SKIL-207ENST00000476188 OSCARQ8IYS5 282 aa37.76■■■■□ 3.64
SKIL-207ENST00000476188 TOP2BQ02880 1626 aa37.73■■■■□ 3.63
SKIL-207ENST00000476188 BIVM-ERCC5R4GMW8 1640 aa37.72■■■■□ 3.63
SKIL-207ENST00000476188 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
SKIL-207ENST00000476188 ABCA10Q8WWZ4 1543 aa37.68■■■■□ 3.62
SKIL-207ENST00000476188 SYNJ1O43426 1573 aa37.63■■■■□ 3.62
SKIL-207ENST00000476188 GRIN2BQ13224 1484 aa37.58■■■■□ 3.61
SKIL-207ENST00000476188 MAGI1Q96QZ7 1491 aaPredicted RBP37.54■■■■□ 3.6
SKIL-207ENST00000476188 GAPVD1Q14C86 1478 aa37.52■■■■□ 3.6
SKIL-207ENST00000476188 ABCA5Q8WWZ7 1642 aa37.51■■■■□ 3.6
SKIL-207ENST00000476188 SNAPC4Q5SXM2 1469 aa37.51■■■■□ 3.59
SKIL-207ENST00000476188 CHD1O14646 1710 aa37.44■■■■□ 3.58
SKIL-207ENST00000476188 PBRM1Q86U86 1689 aa37.4■■■■□ 3.58
SKIL-207ENST00000476188 SYNJ2O15056 1496 aa37.38■■■■□ 3.57
SKIL-207ENST00000476188 FBLN2P98095 1184 aa37.33■■■■□ 3.57
SKIL-207ENST00000476188 CHMP7Q8WUX9 453 aaPredicted RBP37.29■■■■□ 3.56
SKIL-207ENST00000476188 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
SKIL-207ENST00000476188 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
SKIL-207ENST00000476188 ARHGEF11O15085 1522 aa37.16■■■■□ 3.54
SKIL-207ENST00000476188 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
SKIL-207ENST00000476188 RIMBP3CA6NJZ7 1639 aa37.15■■■■□ 3.54
SKIL-207ENST00000476188 RIMBP3BA6NNM3 1639 aa37.15■■■■□ 3.54
SKIL-207ENST00000476188 RIMBP3Q9UFD9 1639 aa37.15■■■■□ 3.54
SKIL-207ENST00000476188 FHAD1B1AJZ9 1412 aa37.13■■■■□ 3.53
SKIL-207ENST00000476188 GRIN2AQ12879 1464 aa37.08■■■■□ 3.53
SKIL-207ENST00000476188 KIF27Q86VH2 1401 aa37.02■■■■□ 3.52
SKIL-207ENST00000476188 NUP160Q12769 1436 aa36.98■■■■□ 3.51
SKIL-207ENST00000476188 TRIM41Q8WV44 630 aa36.96■■■■□ 3.51
SKIL-207ENST00000476188 IGF1RP08069 1367 aa36.88■■■■□ 3.49
SKIL-207ENST00000476188 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
SKIL-207ENST00000476188 ARAP1Q96P48 1450 aa36.85■■■■□ 3.49
SKIL-207ENST00000476188 CUL7Q14999 1698 aa36.82■■■■□ 3.48
SKIL-207ENST00000476188 CYB5RLQ6IPT4 315 aa36.73■■■■□ 3.47
SKIL-207ENST00000476188 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
SKIL-207ENST00000476188 CARMIL1Q5VZK9 1371 aa36.64■■■■□ 3.46
SKIL-207ENST00000476188 RUSC2Q8N2Y8 1516 aa36.62■■■■□ 3.45
SKIL-207ENST00000476188 KIAA0586Q9BVV6 1533 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms