RNA–Protein interactions for RNA: ENST00000475770.5

KRIT1-221, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 2,411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-221ENST00000475770 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
KRIT1-221ENST00000475770 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
KRIT1-221ENST00000475770 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
KRIT1-221ENST00000475770 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
KRIT1-221ENST00000475770 ABCC9O60706 1549 aa15.38■□□□□ 0.05
KRIT1-221ENST00000475770 ZCCHC6Q5VYS8 1495 aaKnown RBP15.28■□□□□ 0.04
KRIT1-221ENST00000475770 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
KRIT1-221ENST00000475770 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
KRIT1-221ENST00000475770 MYO15BQ96JP2 1530 aa15□□□□□ -0.01
KRIT1-221ENST00000475770 NACADO15069 1562 aa14.97□□□□□ -0.01
KRIT1-221ENST00000475770 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
KRIT1-221ENST00000475770 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
KRIT1-221ENST00000475770 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.06
KRIT1-221ENST00000475770 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
KRIT1-221ENST00000475770 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
KRIT1-221ENST00000475770 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
KRIT1-221ENST00000475770 POTEDQ86YR6 584 aa14.52□□□□□ -0.08
KRIT1-221ENST00000475770 MYT1Q01538 1121 aa14.47□□□□□ -0.09
KRIT1-221ENST00000475770 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.09
KRIT1-221ENST00000475770 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
KRIT1-221ENST00000475770 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
KRIT1-221ENST00000475770 TTBK1Q5TCY1 1321 aaPredicted RBP14.26□□□□□ -0.13
KRIT1-221ENST00000475770 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.14
KRIT1-221ENST00000475770 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
KRIT1-221ENST00000475770 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
KRIT1-221ENST00000475770 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
KRIT1-221ENST00000475770 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
KRIT1-221ENST00000475770 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
KRIT1-221ENST00000475770 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
KRIT1-221ENST00000475770 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
KRIT1-221ENST00000475770 WIZO95785 1651 aa13.94□□□□□ -0.18
KRIT1-221ENST00000475770 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
KRIT1-221ENST00000475770 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
KRIT1-221ENST00000475770 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
KRIT1-221ENST00000475770 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
KRIT1-221ENST00000475770 NCAPD3P42695 1498 aa13.83□□□□□ -0.19
KRIT1-221ENST00000475770 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
KRIT1-221ENST00000475770 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
KRIT1-221ENST00000475770 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
KRIT1-221ENST00000475770 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
KRIT1-221ENST00000475770 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
KRIT1-221ENST00000475770 APLP2Q06481 763 aa13.7□□□□□ -0.22
KRIT1-221ENST00000475770 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
KRIT1-221ENST00000475770 ERICH6Q7L0X2 663 aa13.68□□□□□ -0.22
KRIT1-221ENST00000475770 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
KRIT1-221ENST00000475770 FOXD1Q16676 465 aa13.62□□□□□ -0.23
KRIT1-221ENST00000475770 CFTRP13569 1480 aa13.46□□□□□ -0.25
KRIT1-221ENST00000475770 CADPSQ9ULU8 1353 aa13.46□□□□□ -0.25
KRIT1-221ENST00000475770 NESP48681 1621 aa13.42□□□□□ -0.26
KRIT1-221ENST00000475770 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
KRIT1-221ENST00000475770 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
KRIT1-221ENST00000475770 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
KRIT1-221ENST00000475770 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
KRIT1-221ENST00000475770 MSH5O43196 834 aa13.29□□□□□ -0.28
KRIT1-221ENST00000475770 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
KRIT1-221ENST00000475770 CEP164Q9UPV0 1460 aa13.25□□□□□ -0.29
KRIT1-221ENST00000475770 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
KRIT1-221ENST00000475770 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
KRIT1-221ENST00000475770 ERCC6Q03468 1493 aa13.21□□□□□ -0.29
KRIT1-221ENST00000475770 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
KRIT1-221ENST00000475770 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
KRIT1-221ENST00000475770 CUX1P39880 1505 aa13.19□□□□□ -0.3
KRIT1-221ENST00000475770 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
KRIT1-221ENST00000475770 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
KRIT1-221ENST00000475770 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
KRIT1-221ENST00000475770 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
KRIT1-221ENST00000475770 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
KRIT1-221ENST00000475770 WDR62O43379 1518 aa13.1□□□□□ -0.31
KRIT1-221ENST00000475770 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.31
KRIT1-221ENST00000475770 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
KRIT1-221ENST00000475770 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
KRIT1-221ENST00000475770 SOGA1O94964 1423 aa13.01□□□□□ -0.33
KRIT1-221ENST00000475770 CUX2O14529 1486 aa13□□□□□ -0.33
KRIT1-221ENST00000475770 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
KRIT1-221ENST00000475770 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
KRIT1-221ENST00000475770 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
KRIT1-221ENST00000475770 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
KRIT1-221ENST00000475770 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
KRIT1-221ENST00000475770 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
KRIT1-221ENST00000475770 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
KRIT1-221ENST00000475770 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
KRIT1-221ENST00000475770 EEA1Q15075 1411 aa12.9□□□□□ -0.34
KRIT1-221ENST00000475770 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
KRIT1-221ENST00000475770 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■□□□□ 8.5
KRIT1-221ENST00000475770 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
KRIT1-221ENST00000475770 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
KRIT1-221ENST00000475770 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
KRIT1-221ENST00000475770 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
KRIT1-221ENST00000475770 IGF1RP08069 1367 aa12.84□□□□□ -0.35
KRIT1-221ENST00000475770 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
KRIT1-221ENST00000475770 ARXQ96QS3 562 aa12.82□□□□□ -0.36
KRIT1-221ENST00000475770 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
KRIT1-221ENST00000475770 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
KRIT1-221ENST00000475770 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
KRIT1-221ENST00000475770 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
KRIT1-221ENST00000475770 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
KRIT1-221ENST00000475770 PBRM1Q86U86 1689 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms