RNA–Protein interactions for RNA: ENST00000475111.6

TMEM30A-203, Transcript of transmembrane protein 30A, humanhuman

TSL 1 (best) BASIC

Gene TMEM30A, Length 2,791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-203ENST00000475111 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
TMEM30A-203ENST00000475111 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
TMEM30A-203ENST00000475111 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
TMEM30A-203ENST00000475111 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
TMEM30A-203ENST00000475111 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
TMEM30A-203ENST00000475111 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
TMEM30A-203ENST00000475111 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TMEM30A-203ENST00000475111 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
TMEM30A-203ENST00000475111 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
TMEM30A-203ENST00000475111 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
TMEM30A-203ENST00000475111 ABCC9O60706 1549 aa22.14■■□□□ 1.14
TMEM30A-203ENST00000475111 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
TMEM30A-203ENST00000475111 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
TMEM30A-203ENST00000475111 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
TMEM30A-203ENST00000475111 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
TMEM30A-203ENST00000475111 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
TMEM30A-203ENST00000475111 FAM9AQ8IZU1 332 aaPredicted RBP21.72■■□□□ 1.07
TMEM30A-203ENST00000475111 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
TMEM30A-203ENST00000475111 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
TMEM30A-203ENST00000475111 NACADO15069 1562 aa21.65■■□□□ 1.06
TMEM30A-203ENST00000475111 HRCP23327 699 aa21.59■■□□□ 1.05
TMEM30A-203ENST00000475111 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
TMEM30A-203ENST00000475111 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
TMEM30A-203ENST00000475111 WIZO95785 1651 aa21.45■■□□□ 1.02
TMEM30A-203ENST00000475111 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
TMEM30A-203ENST00000475111 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
TMEM30A-203ENST00000475111 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
TMEM30A-203ENST00000475111 UNC13AQ9UPW8 1703 aa21.08■□□□□ 0.96
TMEM30A-203ENST00000475111 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
TMEM30A-203ENST00000475111 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
TMEM30A-203ENST00000475111 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
TMEM30A-203ENST00000475111 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
TMEM30A-203ENST00000475111 TTBK1Q5TCY1 1321 aaPredicted RBP20.95■□□□□ 0.94
TMEM30A-203ENST00000475111 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
TMEM30A-203ENST00000475111 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
TMEM30A-203ENST00000475111 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
TMEM30A-203ENST00000475111 SOGA1O94964 1423 aa20.82■□□□□ 0.92
TMEM30A-203ENST00000475111 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
TMEM30A-203ENST00000475111 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
TMEM30A-203ENST00000475111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
TMEM30A-203ENST00000475111 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
TMEM30A-203ENST00000475111 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
TMEM30A-203ENST00000475111 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
TMEM30A-203ENST00000475111 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
TMEM30A-203ENST00000475111 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.896e-7■■■■■ 33.4
TMEM30A-203ENST00000475111 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
TMEM30A-203ENST00000475111 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
TMEM30A-203ENST00000475111 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
TMEM30A-203ENST00000475111 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
TMEM30A-203ENST00000475111 PEG3Q9GZU2 1588 aa20.48■□□□□ 0.87
TMEM30A-203ENST00000475111 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
TMEM30A-203ENST00000475111 EEA1Q15075 1411 aa20.39■□□□□ 0.86
TMEM30A-203ENST00000475111 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
TMEM30A-203ENST00000475111 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
TMEM30A-203ENST00000475111 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.83
TMEM30A-203ENST00000475111 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
TMEM30A-203ENST00000475111 CLIP1P30622 1438 aa20.24■□□□□ 0.83
TMEM30A-203ENST00000475111 APLP2Q06481 763 aa20.14■□□□□ 0.82
TMEM30A-203ENST00000475111 KIF21BO75037 1637 aa20.14■□□□□ 0.81
TMEM30A-203ENST00000475111 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
TMEM30A-203ENST00000475111 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
TMEM30A-203ENST00000475111 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
TMEM30A-203ENST00000475111 CUX1P39880 1505 aa20.06■□□□□ 0.8
TMEM30A-203ENST00000475111 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
TMEM30A-203ENST00000475111 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
TMEM30A-203ENST00000475111 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
TMEM30A-203ENST00000475111 CFTRP13569 1480 aa19.96■□□□□ 0.79
TMEM30A-203ENST00000475111 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
TMEM30A-203ENST00000475111 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
TMEM30A-203ENST00000475111 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
TMEM30A-203ENST00000475111 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
TMEM30A-203ENST00000475111 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
TMEM30A-203ENST00000475111 ITGAEP38570 1179 aa19.85■□□□□ 0.77
TMEM30A-203ENST00000475111 CUX2O14529 1486 aa19.85■□□□□ 0.77
TMEM30A-203ENST00000475111 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
TMEM30A-203ENST00000475111 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
TMEM30A-203ENST00000475111 ZNF316A6NFI3 1004 aaPredicted RBP19.81■□□□□ 0.76
TMEM30A-203ENST00000475111 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
TMEM30A-203ENST00000475111 NEUROD1Q13562 356 aa19.79■□□□□ 0.76
TMEM30A-203ENST00000475111 IGF1RP08069 1367 aa19.77■□□□□ 0.76
TMEM30A-203ENST00000475111 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.75
TMEM30A-203ENST00000475111 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
TMEM30A-203ENST00000475111 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
TMEM30A-203ENST00000475111 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
TMEM30A-203ENST00000475111 ARHGAP35Q9NRY4 1499 aa19.74■□□□□ 0.75
TMEM30A-203ENST00000475111 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
TMEM30A-203ENST00000475111 NESP48681 1621 aa19.69■□□□□ 0.74
TMEM30A-203ENST00000475111 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
TMEM30A-203ENST00000475111 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
TMEM30A-203ENST00000475111 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
TMEM30A-203ENST00000475111 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
TMEM30A-203ENST00000475111 MIER1Q8N108 512 aa19.64■□□□□ 0.73
TMEM30A-203ENST00000475111 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
TMEM30A-203ENST00000475111 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
TMEM30A-203ENST00000475111 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
TMEM30A-203ENST00000475111 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
TMEM30A-203ENST00000475111 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
TMEM30A-203ENST00000475111 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
TMEM30A-203ENST00000475111 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
TMEM30A-203ENST00000475111 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms