RNA–Protein interactions for RNA: ENST00000474548.1

MRPL38-206, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-206ENST00000474548 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
MRPL38-206ENST00000474548 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
MRPL38-206ENST00000474548 ABCC9O60706 1549 aa33.73■■■□□ 2.99
MRPL38-206ENST00000474548 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
MRPL38-206ENST00000474548 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
MRPL38-206ENST00000474548 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
MRPL38-206ENST00000474548 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
MRPL38-206ENST00000474548 NACADO15069 1562 aa33.09■■■□□ 2.89
MRPL38-206ENST00000474548 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
MRPL38-206ENST00000474548 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
MRPL38-206ENST00000474548 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
MRPL38-206ENST00000474548 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
MRPL38-206ENST00000474548 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
MRPL38-206ENST00000474548 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
MRPL38-206ENST00000474548 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
MRPL38-206ENST00000474548 BAZ1AQ9NRL2 1556 aaPredicted RBP31.03■■■□□ 2.56
MRPL38-206ENST00000474548 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
MRPL38-206ENST00000474548 EIF4G1Q04637 1599 aaKnown RBP30.9■■■□□ 2.54
MRPL38-206ENST00000474548 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
MRPL38-206ENST00000474548 MROH2BQ7Z745 1585 aa30.78■■■□□ 2.52
MRPL38-206ENST00000474548 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
MRPL38-206ENST00000474548 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
MRPL38-206ENST00000474548 SMARCA2P51531 1590 aa30.63■■■□□ 2.49
MRPL38-206ENST00000474548 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
MRPL38-206ENST00000474548 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
MRPL38-206ENST00000474548 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
MRPL38-206ENST00000474548 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
MRPL38-206ENST00000474548 WIZO95785 1651 aa30.43■■■□□ 2.46
MRPL38-206ENST00000474548 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
MRPL38-206ENST00000474548 BAZ1BQ9UIG0 1483 aaKnown RBP30.37■■■□□ 2.45
MRPL38-206ENST00000474548 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
MRPL38-206ENST00000474548 DNAJC5Q9H3Z4 198 aa30.06■■■□□ 2.4
MRPL38-206ENST00000474548 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
MRPL38-206ENST00000474548 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
MRPL38-206ENST00000474548 CFTRP13569 1480 aa29.61■■■□□ 2.33
MRPL38-206ENST00000474548 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
MRPL38-206ENST00000474548 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
MRPL38-206ENST00000474548 NESP48681 1621 aa29.34■■■□□ 2.29
MRPL38-206ENST00000474548 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
MRPL38-206ENST00000474548 CUX2O14529 1486 aa29.25■■■□□ 2.27
MRPL38-206ENST00000474548 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
MRPL38-206ENST00000474548 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
MRPL38-206ENST00000474548 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
MRPL38-206ENST00000474548 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
MRPL38-206ENST00000474548 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
MRPL38-206ENST00000474548 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
MRPL38-206ENST00000474548 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
MRPL38-206ENST00000474548 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
MRPL38-206ENST00000474548 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
MRPL38-206ENST00000474548 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
MRPL38-206ENST00000474548 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
MRPL38-206ENST00000474548 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
MRPL38-206ENST00000474548 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
MRPL38-206ENST00000474548 CUX1P39880 1505 aa28.84■■■□□ 2.21
MRPL38-206ENST00000474548 WDR62O43379 1518 aa28.83■■■□□ 2.21
MRPL38-206ENST00000474548 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
MRPL38-206ENST00000474548 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
MRPL38-206ENST00000474548 SYNJ1O43426 1573 aa28.76■■■□□ 2.19
MRPL38-206ENST00000474548 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
MRPL38-206ENST00000474548 POLA1P09884 1462 aaPredicted RBP28.64■■■□□ 2.17
MRPL38-206ENST00000474548 SOGA1O94964 1423 aa28.62■■■□□ 2.17
MRPL38-206ENST00000474548 IFT140Q96RY7 1462 aa28.58■■■□□ 2.17
MRPL38-206ENST00000474548 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
MRPL38-206ENST00000474548 EEA1Q15075 1411 aa28.45■■■□□ 2.15
MRPL38-206ENST00000474548 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.14
MRPL38-206ENST00000474548 KIF27Q86VH2 1401 aa28.43■■■□□ 2.14
MRPL38-206ENST00000474548 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
MRPL38-206ENST00000474548 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
MRPL38-206ENST00000474548 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
MRPL38-206ENST00000474548 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
MRPL38-206ENST00000474548 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
MRPL38-206ENST00000474548 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
MRPL38-206ENST00000474548 ZNF608Q9ULD9 1512 aaPredicted RBP28.22■■■□□ 2.11
MRPL38-206ENST00000474548 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.113e-6■□□□□ 10.3
MRPL38-206ENST00000474548 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
MRPL38-206ENST00000474548 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
MRPL38-206ENST00000474548 IGF1RP08069 1367 aa28.19■■■□□ 2.1
MRPL38-206ENST00000474548 RUSC2Q8N2Y8 1516 aa28.16■■■□□ 2.1
MRPL38-206ENST00000474548 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
MRPL38-206ENST00000474548 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
MRPL38-206ENST00000474548 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
MRPL38-206ENST00000474548 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
MRPL38-206ENST00000474548 CUL7Q14999 1698 aa28.03■■■□□ 2.08
MRPL38-206ENST00000474548 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
MRPL38-206ENST00000474548 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
MRPL38-206ENST00000474548 PRXQ9BXM0 1461 aa28.01■■■□□ 2.07
MRPL38-206ENST00000474548 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
MRPL38-206ENST00000474548 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.07
MRPL38-206ENST00000474548 SYNJ2O15056 1496 aa27.92■■■□□ 2.06
MRPL38-206ENST00000474548 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
MRPL38-206ENST00000474548 KIF21BO75037 1637 aa27.92■■■□□ 2.06
MRPL38-206ENST00000474548 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
MRPL38-206ENST00000474548 GOLGA3Q08378 1498 aa27.86■■■□□ 2.05
MRPL38-206ENST00000474548 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
MRPL38-206ENST00000474548 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
MRPL38-206ENST00000474548 FBLN2P98095 1184 aa27.79■■■□□ 2.04
MRPL38-206ENST00000474548 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
MRPL38-206ENST00000474548 TNIKQ9UKE5 1360 aa27.7■■■□□ 2.02
MRPL38-206ENST00000474548 NUP160Q12769 1436 aa27.67■■■□□ 2.02
MRPL38-206ENST00000474548 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms