RNA–Protein interactions for RNA: ENST00000474422.1

ACSL3-207, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 760 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-207ENST00000474422 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
ACSL3-207ENST00000474422 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
ACSL3-207ENST00000474422 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
ACSL3-207ENST00000474422 ABCC9O60706 1549 aa18.91■□□□□ 0.62
ACSL3-207ENST00000474422 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
ACSL3-207ENST00000474422 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
ACSL3-207ENST00000474422 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
ACSL3-207ENST00000474422 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
ACSL3-207ENST00000474422 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
ACSL3-207ENST00000474422 NACADO15069 1562 aa17.8■□□□□ 0.44
ACSL3-207ENST00000474422 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
ACSL3-207ENST00000474422 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
ACSL3-207ENST00000474422 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
ACSL3-207ENST00000474422 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
ACSL3-207ENST00000474422 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
ACSL3-207ENST00000474422 FOXD1Q16676 465 aa17.48■□□□□ 0.39
ACSL3-207ENST00000474422 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
ACSL3-207ENST00000474422 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
ACSL3-207ENST00000474422 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
ACSL3-207ENST00000474422 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
ACSL3-207ENST00000474422 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
ACSL3-207ENST00000474422 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
ACSL3-207ENST00000474422 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
ACSL3-207ENST00000474422 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
ACSL3-207ENST00000474422 MSH5O43196 834 aa16.44■□□□□ 0.22
ACSL3-207ENST00000474422 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
ACSL3-207ENST00000474422 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
ACSL3-207ENST00000474422 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
ACSL3-207ENST00000474422 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
ACSL3-207ENST00000474422 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
ACSL3-207ENST00000474422 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
ACSL3-207ENST00000474422 CUX2O14529 1486 aa16.31■□□□□ 0.2
ACSL3-207ENST00000474422 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
ACSL3-207ENST00000474422 NESP48681 1621 aa16.26■□□□□ 0.19
ACSL3-207ENST00000474422 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
ACSL3-207ENST00000474422 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
ACSL3-207ENST00000474422 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
ACSL3-207ENST00000474422 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
ACSL3-207ENST00000474422 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
ACSL3-207ENST00000474422 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
ACSL3-207ENST00000474422 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
ACSL3-207ENST00000474422 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
ACSL3-207ENST00000474422 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
ACSL3-207ENST00000474422 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
ACSL3-207ENST00000474422 ADRA2BP18089 450 aa16.02■□□□□ 0.16
ACSL3-207ENST00000474422 WIZO95785 1651 aa15.98■□□□□ 0.15
ACSL3-207ENST00000474422 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
ACSL3-207ENST00000474422 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
ACSL3-207ENST00000474422 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
ACSL3-207ENST00000474422 WDR62O43379 1518 aa15.85■□□□□ 0.13
ACSL3-207ENST00000474422 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
ACSL3-207ENST00000474422 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
ACSL3-207ENST00000474422 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
ACSL3-207ENST00000474422 CFTRP13569 1480 aa15.74■□□□□ 0.11
ACSL3-207ENST00000474422 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
ACSL3-207ENST00000474422 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
ACSL3-207ENST00000474422 PRDM2Q13029 1718 aa15.64■□□□□ 0.09
ACSL3-207ENST00000474422 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
ACSL3-207ENST00000474422 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
ACSL3-207ENST00000474422 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
ACSL3-207ENST00000474422 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
ACSL3-207ENST00000474422 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
ACSL3-207ENST00000474422 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
ACSL3-207ENST00000474422 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
ACSL3-207ENST00000474422 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
ACSL3-207ENST00000474422 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
ACSL3-207ENST00000474422 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
ACSL3-207ENST00000474422 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
ACSL3-207ENST00000474422 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
ACSL3-207ENST00000474422 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
ACSL3-207ENST00000474422 ARHGEF11O15085 1522 aa15.33■□□□□ 0.05
ACSL3-207ENST00000474422 CHD1O14646 1710 aa15.33■□□□□ 0.04
ACSL3-207ENST00000474422 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.045e-6■□□□□ 11.1
ACSL3-207ENST00000474422 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
ACSL3-207ENST00000474422 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
ACSL3-207ENST00000474422 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
ACSL3-207ENST00000474422 CUX1P39880 1505 aa15.19■□□□□ 0.02
ACSL3-207ENST00000474422 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
ACSL3-207ENST00000474422 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
ACSL3-207ENST00000474422 SOGA1O94964 1423 aa15.17■□□□□ 0.02
ACSL3-207ENST00000474422 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
ACSL3-207ENST00000474422 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
ACSL3-207ENST00000474422 WDR97A6NE52 1622 aa15.15■□□□□ 0.02
ACSL3-207ENST00000474422 FBLN2P98095 1184 aa15.15■□□□□ 0.02
ACSL3-207ENST00000474422 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
ACSL3-207ENST00000474422 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
ACSL3-207ENST00000474422 PBRM1Q86U86 1689 aa15.08■□□□□ 0
ACSL3-207ENST00000474422 GRIN2BQ13224 1484 aa15.08■□□□□ 0
ACSL3-207ENST00000474422 SYNJ1O43426 1573 aa15.07■□□□□ 0
ACSL3-207ENST00000474422 SYNJ2O15056 1496 aa15.04■□□□□ -0
ACSL3-207ENST00000474422 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
ACSL3-207ENST00000474422 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
ACSL3-207ENST00000474422 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
ACSL3-207ENST00000474422 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
ACSL3-207ENST00000474422 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
ACSL3-207ENST00000474422 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
ACSL3-207ENST00000474422 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
ACSL3-207ENST00000474422 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
ACSL3-207ENST00000474422 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
ACSL3-207ENST00000474422 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms