RNA–Protein interactions for RNA: ENST00000474402.5

PHF19-211, Transcript of PHD finger protein 19, humanhuman

TSL 4

Gene PHF19, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-211ENST00000474402 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
PHF19-211ENST00000474402 ABCC9O60706 1549 aa24.71■■□□□ 1.55
PHF19-211ENST00000474402 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
PHF19-211ENST00000474402 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
PHF19-211ENST00000474402 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
PHF19-211ENST00000474402 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
PHF19-211ENST00000474402 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
PHF19-211ENST00000474402 NACADO15069 1562 aa22.72■■□□□ 1.23
PHF19-211ENST00000474402 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
PHF19-211ENST00000474402 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
PHF19-211ENST00000474402 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
PHF19-211ENST00000474402 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
PHF19-211ENST00000474402 CECR2Q9BXF3 1484 aa22.31■■□□□ 1.16
PHF19-211ENST00000474402 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
PHF19-211ENST00000474402 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
PHF19-211ENST00000474402 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
PHF19-211ENST00000474402 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
PHF19-211ENST00000474402 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
PHF19-211ENST00000474402 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
PHF19-211ENST00000474402 CUX2O14529 1486 aa21.53■■□□□ 1.04
PHF19-211ENST00000474402 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
PHF19-211ENST00000474402 TRIM41Q8WV44 630 aa21.31■■□□□ 1
PHF19-211ENST00000474402 NCAPD3P42695 1498 aa21■□□□□ 0.95
PHF19-211ENST00000474402 NESP48681 1621 aa20.98■□□□□ 0.95
PHF19-211ENST00000474402 SMARCA4P51532 1647 aa20.89■□□□□ 0.94
PHF19-211ENST00000474402 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
PHF19-211ENST00000474402 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
PHF19-211ENST00000474402 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
PHF19-211ENST00000474402 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
PHF19-211ENST00000474402 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
PHF19-211ENST00000474402 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
PHF19-211ENST00000474402 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
PHF19-211ENST00000474402 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
PHF19-211ENST00000474402 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
PHF19-211ENST00000474402 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
PHF19-211ENST00000474402 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
PHF19-211ENST00000474402 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
PHF19-211ENST00000474402 WIZO95785 1651 aa20.54■□□□□ 0.88
PHF19-211ENST00000474402 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
PHF19-211ENST00000474402 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
PHF19-211ENST00000474402 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
PHF19-211ENST00000474402 WDR62O43379 1518 aa20.37■□□□□ 0.85
PHF19-211ENST00000474402 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
PHF19-211ENST00000474402 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
PHF19-211ENST00000474402 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
PHF19-211ENST00000474402 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
PHF19-211ENST00000474402 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
PHF19-211ENST00000474402 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
PHF19-211ENST00000474402 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
PHF19-211ENST00000474402 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
PHF19-211ENST00000474402 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
PHF19-211ENST00000474402 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
PHF19-211ENST00000474402 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
PHF19-211ENST00000474402 CFTRP13569 1480 aa20.01■□□□□ 0.79
PHF19-211ENST00000474402 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
PHF19-211ENST00000474402 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
PHF19-211ENST00000474402 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
PHF19-211ENST00000474402 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
PHF19-211ENST00000474402 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
PHF19-211ENST00000474402 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
PHF19-211ENST00000474402 FBLN2P98095 1184 aa19.84■□□□□ 0.77
PHF19-211ENST00000474402 CHD1O14646 1710 aa19.71■□□□□ 0.75
PHF19-211ENST00000474402 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
PHF19-211ENST00000474402 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.741e-7■■■■■ 32.4
PHF19-211ENST00000474402 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
PHF19-211ENST00000474402 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
PHF19-211ENST00000474402 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
PHF19-211ENST00000474402 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
PHF19-211ENST00000474402 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
PHF19-211ENST00000474402 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
PHF19-211ENST00000474402 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
PHF19-211ENST00000474402 CUX1P39880 1505 aa19.46■□□□□ 0.71
PHF19-211ENST00000474402 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
PHF19-211ENST00000474402 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
PHF19-211ENST00000474402 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
PHF19-211ENST00000474402 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
PHF19-211ENST00000474402 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
PHF19-211ENST00000474402 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
PHF19-211ENST00000474402 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
PHF19-211ENST00000474402 SOGA1O94964 1423 aa19.37■□□□□ 0.69
PHF19-211ENST00000474402 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
PHF19-211ENST00000474402 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
PHF19-211ENST00000474402 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
PHF19-211ENST00000474402 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
PHF19-211ENST00000474402 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
PHF19-211ENST00000474402 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
PHF19-211ENST00000474402 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
PHF19-211ENST00000474402 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
PHF19-211ENST00000474402 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
PHF19-211ENST00000474402 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
PHF19-211ENST00000474402 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
PHF19-211ENST00000474402 KDM4FA0A1W2PPD8 638 aa19.13■□□□□ 0.65
PHF19-211ENST00000474402 FAM69CQ0P6D2 419 aa19.09■□□□□ 0.65
PHF19-211ENST00000474402 KIF13AQ9H1H9 1805 aa19.07■□□□□ 0.64
PHF19-211ENST00000474402 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
PHF19-211ENST00000474402 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
PHF19-211ENST00000474402 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
PHF19-211ENST00000474402 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
PHF19-211ENST00000474402 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
PHF19-211ENST00000474402 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms