RNA–Protein interactions for RNA: ENST00000474065.5

CLASP1-211, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 3

Gene CLASP1, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-211ENST00000474065 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
CLASP1-211ENST00000474065 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
CLASP1-211ENST00000474065 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
CLASP1-211ENST00000474065 KIF21AQ7Z4S6 1674 aa12.83□□□□□ -0.36
CLASP1-211ENST00000474065 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CLASP1-211ENST00000474065 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
CLASP1-211ENST00000474065 WDR62O43379 1518 aa12.78□□□□□ -0.36
CLASP1-211ENST00000474065 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
CLASP1-211ENST00000474065 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
CLASP1-211ENST00000474065 TOP2BQ02880 1626 aa12.77□□□□□ -0.37
CLASP1-211ENST00000474065 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLASP1-211ENST00000474065 CUX1P39880 1505 aa12.75□□□□□ -0.37
CLASP1-211ENST00000474065 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
CLASP1-211ENST00000474065 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
CLASP1-211ENST00000474065 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
CLASP1-211ENST00000474065 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
CLASP1-211ENST00000474065 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
CLASP1-211ENST00000474065 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
CLASP1-211ENST00000474065 CUX2O14529 1486 aa12.7□□□□□ -0.38
CLASP1-211ENST00000474065 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
CLASP1-211ENST00000474065 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
CLASP1-211ENST00000474065 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
CLASP1-211ENST00000474065 SOGA1O94964 1423 aa12.66□□□□□ -0.38
CLASP1-211ENST00000474065 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
CLASP1-211ENST00000474065 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
CLASP1-211ENST00000474065 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
CLASP1-211ENST00000474065 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
CLASP1-211ENST00000474065 EEA1Q15075 1411 aa12.62□□□□□ -0.39
CLASP1-211ENST00000474065 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
CLASP1-211ENST00000474065 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
CLASP1-211ENST00000474065 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
CLASP1-211ENST00000474065 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
CLASP1-211ENST00000474065 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
CLASP1-211ENST00000474065 HAX1O00165 279 aa12.56□□□□□ -0.4
CLASP1-211ENST00000474065 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
CLASP1-211ENST00000474065 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
CLASP1-211ENST00000474065 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
CLASP1-211ENST00000474065 ABCA5Q8WWZ7 1642 aa12.5□□□□□ -0.41
CLASP1-211ENST00000474065 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
CLASP1-211ENST00000474065 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
CLASP1-211ENST00000474065 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
CLASP1-211ENST00000474065 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
CLASP1-211ENST00000474065 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.411e-6■■■■□ 26.3
CLASP1-211ENST00000474065 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
CLASP1-211ENST00000474065 IGF1RP08069 1367 aa12.44□□□□□ -0.42
CLASP1-211ENST00000474065 CUL7Q14999 1698 aa12.44□□□□□ -0.42
CLASP1-211ENST00000474065 EVX2Q03828 476 aa12.43□□□□□ -0.42
CLASP1-211ENST00000474065 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
CLASP1-211ENST00000474065 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
CLASP1-211ENST00000474065 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
CLASP1-211ENST00000474065 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
CLASP1-211ENST00000474065 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
CLASP1-211ENST00000474065 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
CLASP1-211ENST00000474065 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
CLASP1-211ENST00000474065 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
CLASP1-211ENST00000474065 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
CLASP1-211ENST00000474065 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
CLASP1-211ENST00000474065 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
CLASP1-211ENST00000474065 KIF21BO75037 1637 aa12.37□□□□□ -0.43
CLASP1-211ENST00000474065 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
CLASP1-211ENST00000474065 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
CLASP1-211ENST00000474065 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
CLASP1-211ENST00000474065 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
CLASP1-211ENST00000474065 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
CLASP1-211ENST00000474065 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
CLASP1-211ENST00000474065 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
CLASP1-211ENST00000474065 NUP160Q12769 1436 aa12.24□□□□□ -0.45
CLASP1-211ENST00000474065 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
CLASP1-211ENST00000474065 KIAA0586Q9BVV6 1533 aa12.23□□□□□ -0.45
CLASP1-211ENST00000474065 CHD1O14646 1710 aa12.22□□□□□ -0.45
CLASP1-211ENST00000474065 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
CLASP1-211ENST00000474065 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
CLASP1-211ENST00000474065 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
CLASP1-211ENST00000474065 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
CLASP1-211ENST00000474065 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
CLASP1-211ENST00000474065 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
CLASP1-211ENST00000474065 GABBR2O75899 941 aa12.15□□□□□ -0.46
CLASP1-211ENST00000474065 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
CLASP1-211ENST00000474065 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
CLASP1-211ENST00000474065 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
CLASP1-211ENST00000474065 UGGT2Q9NYU1 1516 aa12.13□□□□□ -0.47
CLASP1-211ENST00000474065 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
CLASP1-211ENST00000474065 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
CLASP1-211ENST00000474065 CLIP1P30622 1438 aa12.11□□□□□ -0.47
CLASP1-211ENST00000474065 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
CLASP1-211ENST00000474065 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
CLASP1-211ENST00000474065 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
CLASP1-211ENST00000474065 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
CLASP1-211ENST00000474065 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
CLASP1-211ENST00000474065 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
CLASP1-211ENST00000474065 RANGAP1P46060 587 aaPredicted RBP12.04□□□□□ -0.48
CLASP1-211ENST00000474065 DISP1Q96F81 1524 aa12.04□□□□□ -0.48
CLASP1-211ENST00000474065 FMN1Q68DA7 1419 aa12.03□□□□□ -0.48
CLASP1-211ENST00000474065 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
CLASP1-211ENST00000474065 CLCN6P51797 869 aa11.99□□□□□ -0.49
CLASP1-211ENST00000474065 PROM2Q8N271 834 aa11.99□□□□□ -0.49
CLASP1-211ENST00000474065 PTPRGP23470 1445 aa11.99□□□□□ -0.49
CLASP1-211ENST00000474065 FHOD3Q2V2M9 1422 aa11.98□□□□□ -0.49
CLASP1-211ENST00000474065 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
CLASP1-211ENST00000474065 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms