RNA–Protein interactions for RNA: ENST00000473312.5

AGAP3-211, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best) BASIC

Gene AGAP3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-211ENST00000473312 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.08■■■□□ 2.256e-7■■■■■ 151.5
AGAP3-211ENST00000473312 SF3B1O75533 1304 aaKnown RBP eCLIP28.01■■■□□ 2.071e-6■■■■■ 94.8
AGAP3-211ENST00000473312 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP27.22■■□□□ 1.953e-6■■■■■ 69.6
AGAP3-211ENST00000473312 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.86■■■□□ 2.375e-6■■■■■ 39.1
AGAP3-211ENST00000473312 SF3B4Q15427 424 aaKnown RBP eCLIP24.19■■□□□ 1.463e-6■■■■■ 37.5
AGAP3-211ENST00000473312 PCBP2Q15366 365 aaKnown RBP eCLIP26.74■■□□□ 1.871e-6■■■■■ 33.3
AGAP3-211ENST00000473312 PTBP1P26599 531 aaKnown RBP eCLIP24.73■■□□□ 1.553e-12■■■■■ 32.3
AGAP3-211ENST00000473312 XRCC6P12956 609 aaKnown RBP eCLIP32.51■■■□□ 2.86e-6■■■■■ 31.4
AGAP3-211ENST00000473312 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.56■□□□□ 0.887e-12■■■■■ 31.2
AGAP3-211ENST00000473312 HNRNPMP52272 730 aaKnown RBP eCLIP38.18■■■■□ 3.79e-13■■■■■ 29.6
AGAP3-211ENST00000473312 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.39■■□□□ 1.661e-7■■■■■ 29.1
AGAP3-211ENST00000473312 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.94■■□□□ 1.586e-8■■■■■ 27.7
AGAP3-211ENST00000473312 AARSP49588 968 aaKnown RBP eCLIP29.32■■■□□ 2.284e-6■■■■■ 27.3
AGAP3-211ENST00000473312 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.14■■■□□ 2.097e-7■■■■■ 27.1
AGAP3-211ENST00000473312 AQRO60306 1485 aaKnown RBP eCLIP40.55■■■■■ 4.084e-7■■■■■ 26.9
AGAP3-211ENST00000473312 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.13■■■□□ 2.259e-7■■■■□ 26.7
AGAP3-211ENST00000473312 WRNQ14191 1432 aaPredicted RBP eCLIP43.19■■■■■ 4.53e-6■■■■□ 25.8
AGAP3-211ENST00000473312 FMR1Q06787 632 aaKnown RBP eCLIP30.74■■■□□ 2.512e-6■■■■□ 25.5
AGAP3-211ENST00000473312 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.45■■□□□ 1.994e-7■■■■□ 25.1
AGAP3-211ENST00000473312 HNRNPKP61978 463 aaKnown RBP eCLIP24.97■■□□□ 1.594e-7■■■■□ 24.9
AGAP3-211ENST00000473312 NONOQ15233 471 aaKnown RBP eCLIP30.63■■■□□ 2.495e-7■■■■□ 24.8
AGAP3-211ENST00000473312 FXR2P51116 673 aaKnown RBP eCLIP30.44■■■□□ 2.461e-6■■■■□ 24.7
AGAP3-211ENST00000473312 SMNDC1O75940 238 aaKnown RBP eCLIP26.82■■□□□ 1.882e-6■■■■□ 24.6
AGAP3-211ENST00000473312 HNRNPLP14866 589 aaKnown RBP eCLIP27.06■■□□□ 1.923e-7■■■■□ 23.8
AGAP3-211ENST00000473312 EIF4G2P78344 907 aaKnown RBP eCLIP38.11■■■■□ 3.692e-6■■■■□ 23.5
AGAP3-211ENST00000473312 EFTUD2Q15029 972 aaKnown RBP eCLIP28.06■■■□□ 2.088e-10■■■■□ 23.4
AGAP3-211ENST00000473312 RBFOX2O43251 390 aaKnown RBP eCLIP22.42■■□□□ 1.181e-6■■■■□ 23.1
AGAP3-211ENST00000473312 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.54■■■□□ 22e-6■■■■□ 22
AGAP3-211ENST00000473312 PCBP1Q15365 356 aaKnown RBP eCLIP28.48■■■□□ 2.151e-8■■■■□ 21.7
AGAP3-211ENST00000473312 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.23■■■□□ 2.271e-8■■■■□ 21.5
AGAP3-211ENST00000473312 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.03■■■□□ 2.721e-8■■■■□ 21.2
AGAP3-211ENST00000473312 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.58■■□□□ 1.535e-7■■■■□ 21.1
AGAP3-211ENST00000473312 CSTF2P33240 577 aaKnown RBP eCLIP25.29■■□□□ 1.642e-12■■■■□ 21.1
AGAP3-211ENST00000473312 SFPQP23246 707 aaKnown RBP eCLIP30.73■■■□□ 2.514e-6■■■■□ 20.8
AGAP3-211ENST00000473312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.22■■■■□ 3.716e-7■■■■□ 20.4
AGAP3-211ENST00000473312 DKC1O60832 514 aaKnown RBP eCLIP29.44■■■□□ 2.34e-8■■■■□ 20.4
AGAP3-211ENST00000473312 MATR3P43243 847 aaKnown RBP eCLIP29.32■■■□□ 2.283e-6■■■■□ 20.3
AGAP3-211ENST00000473312 TARDBPQ13148 414 aaKnown RBP eCLIP25.39■■□□□ 1.653e-6■■■■□ 20.1
AGAP3-211ENST00000473312 DDX6P26196 483 aaKnown RBP eCLIP26.68■■□□□ 1.862e-6■■■■□ 19.5
AGAP3-211ENST00000473312 FUSP35637 526 aaKnown RBP eCLIP17■□□□□ 0.317e-7■■■■□ 19.3
AGAP3-211ENST00000473312 ZC3H11AO75152 810 aaKnown RBP eCLIP29.18■■■□□ 2.267e-7■■■■□ 19.3
AGAP3-211ENST00000473312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.51■■■■□ 3.596e-6■■■□□ 19.2
AGAP3-211ENST00000473312 SUB1P53999 127 aaKnown RBP eCLIP21.84■■□□□ 1.093e-7■■■□□ 18.9
AGAP3-211ENST00000473312 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.91■■□□□ 1.747e-7■■■□□ 18.6
AGAP3-211ENST00000473312 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.28■■■□□ 2.62e-6■■■□□ 18.5
AGAP3-211ENST00000473312 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.85■■□□□ 1.894e-6■■■□□ 18.5
AGAP3-211ENST00000473312 ILF3Q12906 894 aaKnown RBP eCLIP25.43■■□□□ 1.661e-7■■■□□ 18.3
AGAP3-211ENST00000473312 LSM11P83369 360 aaKnown RBP eCLIP25.26■■□□□ 1.631e-6■■■□□ 17.8
AGAP3-211ENST00000473312 NKRFO15226 690 aaKnown RBP eCLIP29.99■■■□□ 2.392e-7■■■□□ 17.2
AGAP3-211ENST00000473312 EWSR1Q01844 656 aaKnown RBP eCLIP22.81■■□□□ 1.244e-7■■■□□ 17.1
AGAP3-211ENST00000473312 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.4■■□□□ 1.982e-6■■■□□ 16.7
AGAP3-211ENST00000473312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.06■■■■■ 46e-8■■■□□ 14.6
AGAP3-211ENST00000473312 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.88■■□□□ 1.735e-7■■□□□ 14.3
AGAP3-211ENST00000473312 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.39■■■□□ 2.453e-6■■□□□ 13.1
AGAP3-211ENST00000473312 GPKOWQ92917 476 aaPredicted RBP eCLIP30.8■■■□□ 2.523e-6■■□□□ 12.9
AGAP3-211ENST00000473312 YBX3P16989 372 aaKnown RBP eCLIP28.82■■■□□ 2.22e-7■■□□□ 12.5
AGAP3-211ENST00000473312 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.56■■■□□ 29e-7■■□□□ 12.2
AGAP3-211ENST00000473312 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.01■■■□□ 2.239e-7■■□□□ 12.1
AGAP3-211ENST00000473312 GTF2F1P35269 517 aaKnown RBP eCLIP30.79■■■□□ 2.521e-6■■□□□ 12
AGAP3-211ENST00000473312 LARP4Q71RC2 724 aaKnown RBP eCLIP26.92■■□□□ 1.95e-7■■□□□ 11.8
AGAP3-211ENST00000473312 TIA1P31483 386 aaKnown RBP eCLIP26.09■■□□□ 1.772e-6■■□□□ 11.5
AGAP3-211ENST00000473312 PPIGQ13427 754 aaKnown RBP eCLIP26.53■■□□□ 1.847e-8■■□□□ 11.4
AGAP3-211ENST00000473312 METAP2P50579 478 aaKnown RBP eCLIP31.59■■■□□ 2.651e-6■□□□□ 11
AGAP3-211ENST00000473312 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.39■■■□□ 2.621e-5■□□□□ 10.5
AGAP3-211ENST00000473312 PUM1Q14671 1186 aaKnown RBP eCLIP25.62■■□□□ 1.697e-9■□□□□ 10.3
AGAP3-211ENST00000473312 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.94■■■□□ 2.065e-7■□□□□ 9.5
AGAP3-211ENST00000473312 U2AF2P26368 475 aaKnown RBP eCLIP31.39■■■□□ 2.621e-5■□□□□ 9.3
AGAP3-211ENST00000473312 AATFQ9NY61 560 aaKnown RBP eCLIP31.25■■■□□ 2.597e-7■□□□□ 9.1
AGAP3-211ENST00000473312 NIPBLQ6KC79 2804 aaeCLIP18.92■□□□□ 0.626e-6■□□□□ 9
AGAP3-211ENST00000473312 PABPC4Q13310 644 aaKnown RBP eCLIP29.93■■■□□ 2.381e-11■□□□□ 8.4
Retrieved 70 of 70 RNA–protein pairs in 14.5 ms