RNA–Protein interactions for RNA: ENST00000473266.1

RPP21-226, Transcript of ribonuclease P/MRP subunit p21, humanhuman

TSL 5

Gene RPP21, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP21-226ENST00000473266 NISCHQ9Y2I1 1504 aa52.56■■■■■ 6.01
RPP21-226ENST00000473266 CCDC180Q9P1Z9 1646 aa46.94■■■■■ 5.11
RPP21-226ENST00000473266 ABCC9O60706 1549 aa46.42■■■■■ 5.02
RPP21-226ENST00000473266 RB1CC1Q8TDY2 1594 aa44.43■■■■■ 4.7
RPP21-226ENST00000473266 DCAF8L2P0C7V8 631 aa44.3■■■■■ 4.68
RPP21-226ENST00000473266 NACADO15069 1562 aa44.22■■■■■ 4.67
RPP21-226ENST00000473266 MYO15BQ96JP2 1530 aa43.72■■■■■ 4.59
RPP21-226ENST00000473266 ZCCHC6Q5VYS8 1495 aaKnown RBP43.68■■■■■ 4.58
RPP21-226ENST00000473266 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
RPP21-226ENST00000473266 DCAF1Q9Y4B6 1507 aa43.4■■■■■ 4.54
RPP21-226ENST00000473266 PABPN1Q86U42 306 aaKnown RBP eCLIP43.31■■■■■ 4.52
RPP21-226ENST00000473266 BICRAQ9NZM4 1560 aa43.03■■■■■ 4.48
RPP21-226ENST00000473266 DNAJC5BQ9UF47 199 aa42.9■■■■■ 4.46
RPP21-226ENST00000473266 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
RPP21-226ENST00000473266 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
RPP21-226ENST00000473266 EIF4G1Q04637 1599 aaKnown RBP41.97■■■■■ 4.31
RPP21-226ENST00000473266 CC2D2AQ9P2K1 1620 aa41.94■■■■■ 4.3
RPP21-226ENST00000473266 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
RPP21-226ENST00000473266 SMARCA4P51532 1647 aa40.91■■■■■ 4.14
RPP21-226ENST00000473266 BAZ1AQ9NRL2 1556 aaPredicted RBP40.8■■■■■ 4.12
RPP21-226ENST00000473266 NCAPD3P42695 1498 aa40.77■■■■■ 4.12
RPP21-226ENST00000473266 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
RPP21-226ENST00000473266 SMARCA2P51531 1590 aa40.73■■■■■ 4.11
RPP21-226ENST00000473266 HMGXB3Q12766 1538 aa40.57■■■■■ 4.08
RPP21-226ENST00000473266 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
RPP21-226ENST00000473266 BAZ1BQ9UIG0 1483 aaKnown RBP40.47■■■■■ 4.07
RPP21-226ENST00000473266 PEG3Q9GZU2 1588 aa40.43■■■■■ 4.06
RPP21-226ENST00000473266 WIZO95785 1651 aa40.11■■■■■ 4.01
RPP21-226ENST00000473266 ERCC6Q03468 1493 aa40.08■■■■■ 4.01
RPP21-226ENST00000473266 NESP48681 1621 aa40.02■■■■■ 4
RPP21-226ENST00000473266 RSF1Q96T23 1441 aaPredicted RBP39.88■■■■□ 3.97
RPP21-226ENST00000473266 LAMC3Q9Y6N6 1575 aa39.82■■■■□ 3.97
RPP21-226ENST00000473266 CUX2O14529 1486 aa39.71■■■■□ 3.95
RPP21-226ENST00000473266 TOP2AP11388 1531 aaKnown RBP39.62■■■■□ 3.93
RPP21-226ENST00000473266 CADPSQ9ULU8 1353 aa39.6■■■■□ 3.93
RPP21-226ENST00000473266 PDS5BQ9NTI5 1447 aa39.59■■■■□ 3.93
RPP21-226ENST00000473266 KIF21AQ7Z4S6 1674 aa39.56■■■■□ 3.92
RPP21-226ENST00000473266 THOC2Q8NI27 1593 aaKnown RBP39.47■■■■□ 3.91
RPP21-226ENST00000473266 CFTRP13569 1480 aa39.25■■■■□ 3.87
RPP21-226ENST00000473266 MRC2Q9UBG0 1479 aa39.21■■■■□ 3.87
RPP21-226ENST00000473266 CEP164Q9UPV0 1460 aa39.2■■■■□ 3.87
RPP21-226ENST00000473266 FANCD2Q9BXW9 1451 aa39.19■■■■□ 3.86
RPP21-226ENST00000473266 CCDC88BA6NC98 1476 aa39.16■■■■□ 3.86
RPP21-226ENST00000473266 WDR62O43379 1518 aa39.06■■■■□ 3.84
RPP21-226ENST00000473266 PRDM2Q13029 1718 aa39■■■■□ 3.83
RPP21-226ENST00000473266 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
RPP21-226ENST00000473266 URB2Q14146 1524 aaKnown RBP38.8■■■■□ 3.8
RPP21-226ENST00000473266 SUPT5HO00267 1087 aaKnown RBP38.72■■■■□ 3.79
RPP21-226ENST00000473266 TOPBP1Q92547 1522 aa38.5■■■■□ 3.75
RPP21-226ENST00000473266 ABCC8Q09428 1581 aa38.46■■■■□ 3.75
RPP21-226ENST00000473266 DNMBPQ6XZF7 1577 aa38.43■■■■□ 3.74
RPP21-226ENST00000473266 IFT140Q96RY7 1462 aa38.36■■■■□ 3.73
RPP21-226ENST00000473266 ZNF608Q9ULD9 1512 aaPredicted RBP38.23■■■■□ 3.71
RPP21-226ENST00000473266 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
RPP21-226ENST00000473266 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
RPP21-226ENST00000473266 EIF4G3O43432 1585 aaKnown RBP38.09■■■■□ 3.69
RPP21-226ENST00000473266 CUX1P39880 1505 aa38.05■■■■□ 3.68
RPP21-226ENST00000473266 OSCARQ8IYS5 282 aa38.03■■■■□ 3.68
RPP21-226ENST00000473266 FGD5Q6ZNL6 1462 aa38.01■■■■□ 3.67
RPP21-226ENST00000473266 RAD54L2Q9Y4B4 1467 aa38.01■■■■□ 3.67
RPP21-226ENST00000473266 SOGA1O94964 1423 aa38■■■■□ 3.67
RPP21-226ENST00000473266 AQRO60306 1485 aaKnown RBP eCLIP37.98■■■■□ 3.675e-7■■■■□ 19.7
RPP21-226ENST00000473266 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
RPP21-226ENST00000473266 WDR97A6NE52 1622 aa37.75■■■■□ 3.63
RPP21-226ENST00000473266 FBLN2P98095 1184 aa37.73■■■■□ 3.63
RPP21-226ENST00000473266 CHD1O14646 1710 aa37.73■■■■□ 3.63
RPP21-226ENST00000473266 TRIM41Q8WV44 630 aa37.69■■■■□ 3.62
RPP21-226ENST00000473266 WRNQ14191 1432 aaPredicted RBP eCLIP37.66■■■■□ 3.62
RPP21-226ENST00000473266 SNAPC4Q5SXM2 1469 aa37.64■■■■□ 3.62
RPP21-226ENST00000473266 TOP2BQ02880 1626 aa37.61■■■■□ 3.61
RPP21-226ENST00000473266 BIVM-ERCC5R4GMW8 1640 aa37.61■■■■□ 3.61
RPP21-226ENST00000473266 GRIN2BQ13224 1484 aa37.6■■■■□ 3.61
RPP21-226ENST00000473266 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
RPP21-226ENST00000473266 ABCA10Q8WWZ4 1543 aa37.57■■■■□ 3.61
RPP21-226ENST00000473266 GAPVD1Q14C86 1478 aa37.56■■■■□ 3.6
RPP21-226ENST00000473266 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
RPP21-226ENST00000473266 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
RPP21-226ENST00000473266 CHMP7Q8WUX9 453 aaPredicted RBP37.49■■■■□ 3.59
RPP21-226ENST00000473266 RIMBP3CA6NJZ7 1639 aa37.48■■■■□ 3.59
RPP21-226ENST00000473266 RIMBP3BA6NNM3 1639 aa37.48■■■■□ 3.59
RPP21-226ENST00000473266 ABCA5Q8WWZ7 1642 aa37.48■■■■□ 3.59
RPP21-226ENST00000473266 RIMBP3Q9UFD9 1639 aa37.48■■■■□ 3.59
RPP21-226ENST00000473266 ARHGEF11O15085 1522 aa37.4■■■■□ 3.58
RPP21-226ENST00000473266 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
RPP21-226ENST00000473266 CLASP1Q7Z460 1538 aa37.22■■■■□ 3.55
RPP21-226ENST00000473266 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
RPP21-226ENST00000473266 CYB5RLQ6IPT4 315 aa37.14■■■■□ 3.54
RPP21-226ENST00000473266 ERICH3Q5RHP9 1530 aa37.13■■■■□ 3.53
RPP21-226ENST00000473266 GRIN2AQ12879 1464 aa37.11■■■■□ 3.53
RPP21-226ENST00000473266 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
RPP21-226ENST00000473266 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
RPP21-226ENST00000473266 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
RPP21-226ENST00000473266 NUP160Q12769 1436 aa36.92■■■■□ 3.5
RPP21-226ENST00000473266 KIF27Q86VH2 1401 aa36.92■■■■□ 3.5
RPP21-226ENST00000473266 IGF1RP08069 1367 aa36.77■■■■□ 3.48
RPP21-226ENST00000473266 CUL7Q14999 1698 aa36.76■■■■□ 3.47
RPP21-226ENST00000473266 ERCC6L2Q5T890 1561 aa36.71■■■■□ 3.47
RPP21-226ENST00000473266 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
RPP21-226ENST00000473266 RUSC2Q8N2Y8 1516 aa36.64■■■■□ 3.46
RPP21-226ENST00000473266 TRHP20396 242 aaPredicted RBP36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms