RNA–Protein interactions for RNA: ENST00000473069.1

RAD18-209, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RAD18, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-209ENST00000473069 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
RAD18-209ENST00000473069 AEBP2Q6ZN18 517 aaPredicted RBP29.09■■■□□ 2.25
RAD18-209ENST00000473069 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
RAD18-209ENST00000473069 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
RAD18-209ENST00000473069 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
RAD18-209ENST00000473069 ADRA2BP18089 450 aa22.68■■□□□ 1.22
RAD18-209ENST00000473069 FOXD1Q16676 465 aa22.67■■□□□ 1.22
RAD18-209ENST00000473069 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
RAD18-209ENST00000473069 KCNA4P22459 653 aa22.01■■□□□ 1.11
RAD18-209ENST00000473069 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
RAD18-209ENST00000473069 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
RAD18-209ENST00000473069 PPP4R3CPQ6ZMV5 832 aa21.47■■□□□ 1.03
RAD18-209ENST00000473069 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
RAD18-209ENST00000473069 SLC4A1APQ9BWU0 796 aaKnown RBP21.14■□□□□ 0.97
RAD18-209ENST00000473069 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
RAD18-209ENST00000473069 NPM3O75607 178 aaKnown RBP20.85■□□□□ 0.93
RAD18-209ENST00000473069 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
RAD18-209ENST00000473069 CNKSR2Q8WXI2 1034 aa20.65■□□□□ 0.9
RAD18-209ENST00000473069 MSH5O43196 834 aa20.53■□□□□ 0.88
RAD18-209ENST00000473069 ZBTB22O15209 634 aa20.25■□□□□ 0.83
RAD18-209ENST00000473069 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
RAD18-209ENST00000473069 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
RAD18-209ENST00000473069 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
RAD18-209ENST00000473069 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
RAD18-209ENST00000473069 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
RAD18-209ENST00000473069 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
RAD18-209ENST00000473069 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
RAD18-209ENST00000473069 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
RAD18-209ENST00000473069 ATXN8OSP0DMR3 200 aa19.18■□□□□ 0.66
RAD18-209ENST00000473069 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
RAD18-209ENST00000473069 FKBP8Q14318 412 aa18.88■□□□□ 0.61
RAD18-209ENST00000473069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAD18-209ENST00000473069 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
RAD18-209ENST00000473069 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
RAD18-209ENST00000473069 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
RAD18-209ENST00000473069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
RAD18-209ENST00000473069 HNRNPUL2Q1KMD3 747 aaKnown RBP18.64■□□□□ 0.57
RAD18-209ENST00000473069 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
RAD18-209ENST00000473069 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
RAD18-209ENST00000473069 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
RAD18-209ENST00000473069 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
RAD18-209ENST00000473069 APLP2Q06481 763 aa18.24■□□□□ 0.51
RAD18-209ENST00000473069 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
RAD18-209ENST00000473069 FBXO3Q9UK99 471 aa17.93■□□□□ 0.46
RAD18-209ENST00000473069 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
RAD18-209ENST00000473069 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
RAD18-209ENST00000473069 FBLN2P98095 1184 aa17.85■□□□□ 0.45
RAD18-209ENST00000473069 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
RAD18-209ENST00000473069 POLA2Q14181 598 aa17.76■□□□□ 0.43
RAD18-209ENST00000473069 CAPN15O75808 1086 aa17.72■□□□□ 0.43
RAD18-209ENST00000473069 PROM2Q8N271 834 aa17.72■□□□□ 0.43
RAD18-209ENST00000473069 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
RAD18-209ENST00000473069 VASPP50552 380 aaPredicted RBP17.65■□□□□ 0.42
RAD18-209ENST00000473069 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
RAD18-209ENST00000473069 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
RAD18-209ENST00000473069 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
RAD18-209ENST00000473069 ABCB7O75027 752 aa17.46■□□□□ 0.39
RAD18-209ENST00000473069 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
RAD18-209ENST00000473069 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
RAD18-209ENST00000473069 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
RAD18-209ENST00000473069 PKD2Q13563 968 aa17.25■□□□□ 0.35
RAD18-209ENST00000473069 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
RAD18-209ENST00000473069 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
RAD18-209ENST00000473069 DSG3P32926 999 aa17.15■□□□□ 0.34
RAD18-209ENST00000473069 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
RAD18-209ENST00000473069 SPOCK2Q92563 424 aa17.14■□□□□ 0.33
RAD18-209ENST00000473069 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
RAD18-209ENST00000473069 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
RAD18-209ENST00000473069 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
RAD18-209ENST00000473069 SPDYE2Q495Y8 402 aa17.1■□□□□ 0.33
RAD18-209ENST00000473069 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
RAD18-209ENST00000473069 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
RAD18-209ENST00000473069 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
RAD18-209ENST00000473069 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
RAD18-209ENST00000473069 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
RAD18-209ENST00000473069 MIER1Q8N108 512 aa16.97■□□□□ 0.31
RAD18-209ENST00000473069 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
RAD18-209ENST00000473069 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
RAD18-209ENST00000473069 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
RAD18-209ENST00000473069 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAD18-209ENST00000473069 RGL2O15211 777 aa16.81■□□□□ 0.28
RAD18-209ENST00000473069 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
RAD18-209ENST00000473069 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
RAD18-209ENST00000473069 BCANQ96GW7 911 aa16.77■□□□□ 0.28
RAD18-209ENST00000473069 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
RAD18-209ENST00000473069 CFAP44Q96MT7 982 aa16.76■□□□□ 0.27
RAD18-209ENST00000473069 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
RAD18-209ENST00000473069 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
RAD18-209ENST00000473069 KDM2AQ9Y2K7 1162 aa16.63■□□□□ 0.25
RAD18-209ENST00000473069 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
RAD18-209ENST00000473069 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
RAD18-209ENST00000473069 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
RAD18-209ENST00000473069 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
RAD18-209ENST00000473069 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
RAD18-209ENST00000473069 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
RAD18-209ENST00000473069 GSE1Q14687 1217 aa16.47■□□□□ 0.23
RAD18-209ENST00000473069 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
RAD18-209ENST00000473069 NUBP1P53384 320 aa16.39■□□□□ 0.21
RAD18-209ENST00000473069 DCAF8Q5TAQ9 597 aa16.39■□□□□ 0.21
RAD18-209ENST00000473069 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 315.6 ms