RNA–Protein interactions for RNA: ENST00000473012.1

UROD-213, Transcript of uroporphyrinogen decarboxylase, humanhuman

TSL 3

Gene UROD, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UROD-213ENST00000473012 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
UROD-213ENST00000473012 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
UROD-213ENST00000473012 ABCC9O60706 1549 aa26.8■■□□□ 1.88
UROD-213ENST00000473012 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
UROD-213ENST00000473012 NACADO15069 1562 aa25.75■■□□□ 1.71
UROD-213ENST00000473012 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
UROD-213ENST00000473012 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
UROD-213ENST00000473012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
UROD-213ENST00000473012 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
UROD-213ENST00000473012 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
UROD-213ENST00000473012 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
UROD-213ENST00000473012 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
UROD-213ENST00000473012 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
UROD-213ENST00000473012 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
UROD-213ENST00000473012 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
UROD-213ENST00000473012 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
UROD-213ENST00000473012 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
UROD-213ENST00000473012 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.46
UROD-213ENST00000473012 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
UROD-213ENST00000473012 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
UROD-213ENST00000473012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
UROD-213ENST00000473012 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
UROD-213ENST00000473012 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
UROD-213ENST00000473012 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
UROD-213ENST00000473012 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
UROD-213ENST00000473012 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
UROD-213ENST00000473012 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
UROD-213ENST00000473012 DNAJC5Q9H3Z4 198 aa23.32■■□□□ 1.32
UROD-213ENST00000473012 WIZO95785 1651 aa23.29■■□□□ 1.32
UROD-213ENST00000473012 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
UROD-213ENST00000473012 NESP48681 1621 aa23.16■■□□□ 1.3
UROD-213ENST00000473012 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
UROD-213ENST00000473012 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
UROD-213ENST00000473012 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
UROD-213ENST00000473012 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
UROD-213ENST00000473012 CUX2O14529 1486 aa23.01■■□□□ 1.27
UROD-213ENST00000473012 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
UROD-213ENST00000473012 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
UROD-213ENST00000473012 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
UROD-213ENST00000473012 CFTRP13569 1480 aa22.88■■□□□ 1.25
UROD-213ENST00000473012 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
UROD-213ENST00000473012 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
UROD-213ENST00000473012 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
UROD-213ENST00000473012 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
UROD-213ENST00000473012 WDR62O43379 1518 aa22.7■■□□□ 1.22
UROD-213ENST00000473012 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
UROD-213ENST00000473012 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
UROD-213ENST00000473012 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
UROD-213ENST00000473012 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
UROD-213ENST00000473012 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
UROD-213ENST00000473012 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
UROD-213ENST00000473012 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
UROD-213ENST00000473012 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
UROD-213ENST00000473012 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
UROD-213ENST00000473012 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
UROD-213ENST00000473012 CUX1P39880 1505 aa22.14■■□□□ 1.13
UROD-213ENST00000473012 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
UROD-213ENST00000473012 SOGA1O94964 1423 aa22.06■■□□□ 1.12
UROD-213ENST00000473012 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
UROD-213ENST00000473012 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
UROD-213ENST00000473012 WDR97A6NE52 1622 aa22.02■■□□□ 1.11
UROD-213ENST00000473012 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
UROD-213ENST00000473012 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.112e-7■■■■□ 25.9
UROD-213ENST00000473012 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
UROD-213ENST00000473012 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
UROD-213ENST00000473012 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
UROD-213ENST00000473012 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
UROD-213ENST00000473012 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
UROD-213ENST00000473012 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
UROD-213ENST00000473012 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
UROD-213ENST00000473012 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
UROD-213ENST00000473012 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
UROD-213ENST00000473012 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
UROD-213ENST00000473012 CHD1O14646 1710 aa21.81■■□□□ 1.08
UROD-213ENST00000473012 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
UROD-213ENST00000473012 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
UROD-213ENST00000473012 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
UROD-213ENST00000473012 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
UROD-213ENST00000473012 FBLN2P98095 1184 aa21.7■■□□□ 1.06
UROD-213ENST00000473012 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
UROD-213ENST00000473012 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
UROD-213ENST00000473012 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
UROD-213ENST00000473012 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
UROD-213ENST00000473012 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
UROD-213ENST00000473012 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
UROD-213ENST00000473012 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
UROD-213ENST00000473012 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
UROD-213ENST00000473012 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
UROD-213ENST00000473012 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
UROD-213ENST00000473012 NUP160Q12769 1436 aa21.5■■□□□ 1.03
UROD-213ENST00000473012 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
UROD-213ENST00000473012 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
UROD-213ENST00000473012 IGF1RP08069 1367 aa21.45■■□□□ 1.02
UROD-213ENST00000473012 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
UROD-213ENST00000473012 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
UROD-213ENST00000473012 CUL7Q14999 1698 aa21.37■■□□□ 1.01
UROD-213ENST00000473012 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
UROD-213ENST00000473012 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
UROD-213ENST00000473012 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
UROD-213ENST00000473012 ERCC6L2Q5T890 1561 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms