RNA–Protein interactions for RNA: ENST00000472897.5

RBM3-205, Transcript of RNA binding motif protein 3, humanhuman

TSL 5

Gene RBM3, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-205ENST00000472897 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
RBM3-205ENST00000472897 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
RBM3-205ENST00000472897 ABCC9O60706 1549 aa32.4■■■□□ 2.78
RBM3-205ENST00000472897 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
RBM3-205ENST00000472897 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
RBM3-205ENST00000472897 NACADO15069 1562 aa31.34■■■□□ 2.61
RBM3-205ENST00000472897 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
RBM3-205ENST00000472897 RB1CC1Q8TDY2 1594 aa31.28■■■□□ 2.6
RBM3-205ENST00000472897 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
RBM3-205ENST00000472897 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
RBM3-205ENST00000472897 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
RBM3-205ENST00000472897 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.452e-6■□□□□ 8.1
RBM3-205ENST00000472897 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
RBM3-205ENST00000472897 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
RBM3-205ENST00000472897 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
RBM3-205ENST00000472897 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
RBM3-205ENST00000472897 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
RBM3-205ENST00000472897 CC2D2AQ9P2K1 1620 aa29.3■■■□□ 2.28
RBM3-205ENST00000472897 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
RBM3-205ENST00000472897 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
RBM3-205ENST00000472897 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
RBM3-205ENST00000472897 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
RBM3-205ENST00000472897 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
RBM3-205ENST00000472897 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
RBM3-205ENST00000472897 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
RBM3-205ENST00000472897 RSF1Q96T23 1441 aaPredicted RBP28.81■■■□□ 2.2
RBM3-205ENST00000472897 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
RBM3-205ENST00000472897 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
RBM3-205ENST00000472897 WIZO95785 1651 aa28.65■■■□□ 2.18
RBM3-205ENST00000472897 TOP2AP11388 1531 aaKnown RBP28.41■■■□□ 2.14
RBM3-205ENST00000472897 SUPT5HO00267 1087 aaKnown RBP28.24■■■□□ 2.11
RBM3-205ENST00000472897 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
RBM3-205ENST00000472897 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
RBM3-205ENST00000472897 NESP48681 1621 aa28.1■■■□□ 2.09
RBM3-205ENST00000472897 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
RBM3-205ENST00000472897 CFTRP13569 1480 aa27.99■■■□□ 2.07
RBM3-205ENST00000472897 PDS5BQ9NTI5 1447 aa27.96■■■□□ 2.07
RBM3-205ENST00000472897 ERCC6Q03468 1493 aa27.91■■■□□ 2.06
RBM3-205ENST00000472897 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
RBM3-205ENST00000472897 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
RBM3-205ENST00000472897 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
RBM3-205ENST00000472897 PRDM2Q13029 1718 aa27.62■■■□□ 2.01
RBM3-205ENST00000472897 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
RBM3-205ENST00000472897 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
RBM3-205ENST00000472897 CUX2O14529 1486 aa27.58■■■□□ 2.01
RBM3-205ENST00000472897 WDR62O43379 1518 aa27.49■■□□□ 1.99
RBM3-205ENST00000472897 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
RBM3-205ENST00000472897 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
RBM3-205ENST00000472897 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
RBM3-205ENST00000472897 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
RBM3-205ENST00000472897 CUX1P39880 1505 aa27.19■■□□□ 1.94
RBM3-205ENST00000472897 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
RBM3-205ENST00000472897 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
RBM3-205ENST00000472897 POLA1P09884 1462 aaPredicted RBP27.11■■□□□ 1.93
RBM3-205ENST00000472897 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
RBM3-205ENST00000472897 SOGA1O94964 1423 aa27.06■■□□□ 1.92
RBM3-205ENST00000472897 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
RBM3-205ENST00000472897 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
RBM3-205ENST00000472897 RAD54L2Q9Y4B4 1467 aa26.99■■□□□ 1.91
RBM3-205ENST00000472897 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
RBM3-205ENST00000472897 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
RBM3-205ENST00000472897 ZNF608Q9ULD9 1512 aaPredicted RBP26.94■■□□□ 1.9
RBM3-205ENST00000472897 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
RBM3-205ENST00000472897 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
RBM3-205ENST00000472897 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.892e-11■■■■■ 28.6
RBM3-205ENST00000472897 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
RBM3-205ENST00000472897 EIF4G3O43432 1585 aaKnown RBP26.79■■□□□ 1.88
RBM3-205ENST00000472897 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
RBM3-205ENST00000472897 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
RBM3-205ENST00000472897 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
RBM3-205ENST00000472897 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
RBM3-205ENST00000472897 MAGI1Q96QZ7 1491 aaPredicted RBP26.59■■□□□ 1.85
RBM3-205ENST00000472897 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
RBM3-205ENST00000472897 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
RBM3-205ENST00000472897 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
RBM3-205ENST00000472897 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
RBM3-205ENST00000472897 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
RBM3-205ENST00000472897 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
RBM3-205ENST00000472897 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
RBM3-205ENST00000472897 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
RBM3-205ENST00000472897 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
RBM3-205ENST00000472897 IGF1RP08069 1367 aa26.48■■□□□ 1.83
RBM3-205ENST00000472897 FBLN2P98095 1184 aa26.48■■□□□ 1.83
RBM3-205ENST00000472897 FHAD1B1AJZ9 1412 aa26.44■■□□□ 1.82
RBM3-205ENST00000472897 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
RBM3-205ENST00000472897 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
RBM3-205ENST00000472897 CHD1O14646 1710 aa26.36■■□□□ 1.81
RBM3-205ENST00000472897 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
RBM3-205ENST00000472897 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
RBM3-205ENST00000472897 CUL7Q14999 1698 aa26.28■■□□□ 1.8
RBM3-205ENST00000472897 EEA1Q15075 1411 aa26.25■■□□□ 1.79
RBM3-205ENST00000472897 NUP160Q12769 1436 aa26.22■■□□□ 1.79
RBM3-205ENST00000472897 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
RBM3-205ENST00000472897 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
RBM3-205ENST00000472897 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
RBM3-205ENST00000472897 CEP170Q5SW79 1584 aa26.14■■□□□ 1.78
RBM3-205ENST00000472897 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
RBM3-205ENST00000472897 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
RBM3-205ENST00000472897 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
RBM3-205ENST00000472897 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms