RNA–Protein interactions for RNA: ENST00000472832.2

PTEN-203, Transcript of phosphatase and tensin homolog, humanhuman

TSL 2

Gene PTEN, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-203ENST00000472832 AEBP2Q6ZN18 517 aaPredicted RBP29.49■■■□□ 2.31
PTEN-203ENST00000472832 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
PTEN-203ENST00000472832 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
PTEN-203ENST00000472832 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
PTEN-203ENST00000472832 FOXD1Q16676 465 aa23.62■■□□□ 1.37
PTEN-203ENST00000472832 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
PTEN-203ENST00000472832 MSH5O43196 834 aa22.35■■□□□ 1.17
PTEN-203ENST00000472832 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
PTEN-203ENST00000472832 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.09
PTEN-203ENST00000472832 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
PTEN-203ENST00000472832 ADRA2BP18089 450 aa21.56■■□□□ 1.04
PTEN-203ENST00000472832 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
PTEN-203ENST00000472832 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
PTEN-203ENST00000472832 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
PTEN-203ENST00000472832 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
PTEN-203ENST00000472832 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
PTEN-203ENST00000472832 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
PTEN-203ENST00000472832 RNF39Q9H2S5 420 aa19■□□□□ 0.63
PTEN-203ENST00000472832 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
PTEN-203ENST00000472832 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
PTEN-203ENST00000472832 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
PTEN-203ENST00000472832 C1QBPQ07021 282 aaKnown RBP18.7■□□□□ 0.58
PTEN-203ENST00000472832 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
PTEN-203ENST00000472832 KCNA4P22459 653 aa18.46■□□□□ 0.55
PTEN-203ENST00000472832 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
PTEN-203ENST00000472832 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
PTEN-203ENST00000472832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTEN-203ENST00000472832 POTEHQ6S545 545 aa17.72■□□□□ 0.43
PTEN-203ENST00000472832 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
PTEN-203ENST00000472832 CAPN15O75808 1086 aa17.62■□□□□ 0.41
PTEN-203ENST00000472832 DSG3P32926 999 aa17.6■□□□□ 0.41
PTEN-203ENST00000472832 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
PTEN-203ENST00000472832 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
PTEN-203ENST00000472832 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
PTEN-203ENST00000472832 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
PTEN-203ENST00000472832 APLP2Q06481 763 aa17.17■□□□□ 0.34
PTEN-203ENST00000472832 ABCB7O75027 752 aa17.15■□□□□ 0.34
PTEN-203ENST00000472832 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
PTEN-203ENST00000472832 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
PTEN-203ENST00000472832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
PTEN-203ENST00000472832 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
PTEN-203ENST00000472832 ZBTB22O15209 634 aa16.98■□□□□ 0.31
PTEN-203ENST00000472832 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
PTEN-203ENST00000472832 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
PTEN-203ENST00000472832 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
PTEN-203ENST00000472832 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
PTEN-203ENST00000472832 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
PTEN-203ENST00000472832 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
PTEN-203ENST00000472832 POLA2Q14181 598 aa16.6■□□□□ 0.25
PTEN-203ENST00000472832 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
PTEN-203ENST00000472832 ATXN8OSP0DMR3 200 aa16.45■□□□□ 0.22
PTEN-203ENST00000472832 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
PTEN-203ENST00000472832 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
PTEN-203ENST00000472832 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
PTEN-203ENST00000472832 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
PTEN-203ENST00000472832 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
PTEN-203ENST00000472832 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
PTEN-203ENST00000472832 HAX1O00165 279 aa16.05■□□□□ 0.16
PTEN-203ENST00000472832 PITPNM1O00562 1244 aa16■□□□□ 0.15
PTEN-203ENST00000472832 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTEN-203ENST00000472832 FBLN2P98095 1184 aa15.85■□□□□ 0.13
PTEN-203ENST00000472832 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
PTEN-203ENST00000472832 EVX2Q03828 476 aa15.75■□□□□ 0.11
PTEN-203ENST00000472832 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
PTEN-203ENST00000472832 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
PTEN-203ENST00000472832 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
PTEN-203ENST00000472832 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
PTEN-203ENST00000472832 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
PTEN-203ENST00000472832 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
PTEN-203ENST00000472832 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
PTEN-203ENST00000472832 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
PTEN-203ENST00000472832 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
PTEN-203ENST00000472832 GABBR2O75899 941 aa15.39■□□□□ 0.05
PTEN-203ENST00000472832 LHX8Q68G74 356 aa15.34■□□□□ 0.05
PTEN-203ENST00000472832 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
PTEN-203ENST00000472832 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
PTEN-203ENST00000472832 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTEN-203ENST00000472832 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
PTEN-203ENST00000472832 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
PTEN-203ENST00000472832 FKBP8Q14318 412 aa15.05■□□□□ -0
PTEN-203ENST00000472832 POTEIP0CG38 1075 aa15.03■□□□□ -0
PTEN-203ENST00000472832 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
PTEN-203ENST00000472832 CLCN6P51797 869 aa14.98□□□□□ -0.01
PTEN-203ENST00000472832 PROM2Q8N271 834 aa14.98□□□□□ -0.01
PTEN-203ENST00000472832 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
PTEN-203ENST00000472832 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
PTEN-203ENST00000472832 PLSCR2Q9NRY7 297 aa14.84□□□□□ -0.03
PTEN-203ENST00000472832 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
PTEN-203ENST00000472832 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
PTEN-203ENST00000472832 CREBZFQ9NS37 354 aa14.73□□□□□ -0.05
PTEN-203ENST00000472832 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
PTEN-203ENST00000472832 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
PTEN-203ENST00000472832 MIER1Q8N108 512 aa14.58□□□□□ -0.08
PTEN-203ENST00000472832 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
PTEN-203ENST00000472832 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
PTEN-203ENST00000472832 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
PTEN-203ENST00000472832 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
PTEN-203ENST00000472832 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
PTEN-203ENST00000472832 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
PTEN-203ENST00000472832 POTEMA6NI47 508 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms