RNA–Protein interactions for RNA: ENST00000472528.5

TKT-211, Transcript of transketolase, humanhuman

TSL 1 (best)

Gene TKT, Length 1,055 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKT-211ENST00000472528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.211e-18■■■■■ 447.2
TKT-211ENST00000472528 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.91□□□□□ -0.023e-6■■■■■ 50.8
TKT-211ENST00000472528 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.223e-6■■■■■ 44.6
TKT-211ENST00000472528 XRCC6P12956 609 aaKnown RBP eCLIP17.04■□□□□ 0.321e-8■■■■■ 43.1
TKT-211ENST00000472528 METAP2P50579 478 aaKnown RBP eCLIP17.72■□□□□ 0.431e-10■■■■■ 39.3
TKT-211ENST00000472528 EFTUD2Q15029 972 aaKnown RBP eCLIP14.9□□□□□ -0.025e-7■■■■■ 36.5
TKT-211ENST00000472528 SF3B4Q15427 424 aaKnown RBP eCLIP13.67□□□□□ -0.224e-8■■■■■ 30.8
TKT-211ENST00000472528 RBM22Q9NW64 420 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■■■ 29.3
TKT-211ENST00000472528 PTBP1P26599 531 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■■□ 25.1
TKT-211ENST00000472528 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.294e-9■■■■□ 23.3
TKT-211ENST00000472528 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.766e-7■■■■□ 21.7
TKT-211ENST00000472528 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.51□□□□□ -0.413e-7■■■□□ 18.3
TKT-211ENST00000472528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■■□□ 16.7
TKT-211ENST00000472528 HNRNPKP61978 463 aaKnown RBP eCLIP15.08■□□□□ 01e-7■■■□□ 16.2
TKT-211ENST00000472528 RPS3P23396 243 aaKnown RBP eCLIP14.98□□□□□ -0.016e-10■■■□□ 15.8
TKT-211ENST00000472528 GRSF1Q12849 480 aaKnown RBP eCLIP15.71■□□□□ 0.112e-8■■■□□ 15.2
TKT-211ENST00000472528 SND1Q7KZF4 910 aaKnown RBP eCLIP15.8■□□□□ 0.128e-12■■□□□ 14.5
TKT-211ENST00000472528 DDX3XO00571 662 aaKnown RBP eCLIP15.98■□□□□ 0.151e-43■■□□□ 13.8
TKT-211ENST00000472528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.05■■□□□ 1.443e-6■■□□□ 13.1
TKT-211ENST00000472528 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.45■□□□□ 0.386e-9■■□□□ 12.9
TKT-211ENST00000472528 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.216e-6■■□□□ 12.4
TKT-211ENST00000472528 PCBP1Q15365 356 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■□□□ 11.6
TKT-211ENST00000472528 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.673e-13■□□□□ 11.3
TKT-211ENST00000472528 PRPF4O43172 522 aaKnown RBP eCLIP14.54□□□□□ -0.086e-9■□□□□ 11.3
TKT-211ENST00000472528 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■□□□□ 10.9
TKT-211ENST00000472528 RBFOX2O43251 390 aaKnown RBP eCLIP12.06□□□□□ -0.485e-6■□□□□ 10.9
TKT-211ENST00000472528 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.348e-7■□□□□ 10.7
TKT-211ENST00000472528 G3BP1Q13283 466 aaKnown RBP eCLIP18.89■□□□□ 0.612e-8■□□□□ 10.6
TKT-211ENST00000472528 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■□□□□ 9.6
TKT-211ENST00000472528 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■□□□□ 9.2
TKT-211ENST00000472528 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.579e-7■□□□□ 9.1
TKT-211ENST00000472528 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.464e-9■□□□□ 8.5
TKT-211ENST00000472528 ILF3Q12906 894 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■□□□□ 8.5
TKT-211ENST00000472528 SF3A3Q12874 501 aaKnown RBP eCLIP14.13□□□□□ -0.157e-7■□□□□ 8.2
TKT-211ENST00000472528 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.77□□□□□ -0.214e-8■□□□□ 8.2
Retrieved 35 of 35 RNA–protein pairs in 9 ms