RNA–Protein interactions for RNA: ENST00000472491.1

NOM1-204, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 3

Gene NOM1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-204ENST00000472491 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
NOM1-204ENST00000472491 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
NOM1-204ENST00000472491 ABCC9O60706 1549 aa37.89■■■■□ 3.66
NOM1-204ENST00000472491 DCAF8L2P0C7V8 631 aa36.47■■■■□ 3.43
NOM1-204ENST00000472491 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
NOM1-204ENST00000472491 NACADO15069 1562 aa36.38■■■■□ 3.41
NOM1-204ENST00000472491 ZCCHC6Q5VYS8 1495 aaKnown RBP36.2■■■■□ 3.39
NOM1-204ENST00000472491 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
NOM1-204ENST00000472491 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
NOM1-204ENST00000472491 UNC13AQ9UPW8 1703 aa35.57■■■■□ 3.28
NOM1-204ENST00000472491 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
NOM1-204ENST00000472491 SCRIBQ14160 1630 aa35.32■■■■□ 3.24
NOM1-204ENST00000472491 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
NOM1-204ENST00000472491 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
NOM1-204ENST00000472491 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
NOM1-204ENST00000472491 EIF4G1Q04637 1599 aaKnown RBP34.38■■■■□ 3.09
NOM1-204ENST00000472491 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.07
NOM1-204ENST00000472491 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
NOM1-204ENST00000472491 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
NOM1-204ENST00000472491 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
NOM1-204ENST00000472491 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
NOM1-204ENST00000472491 SMARCA2P51531 1590 aa33.56■■■□□ 2.96
NOM1-204ENST00000472491 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
NOM1-204ENST00000472491 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.95
NOM1-204ENST00000472491 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
NOM1-204ENST00000472491 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
NOM1-204ENST00000472491 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
NOM1-204ENST00000472491 WIZO95785 1651 aa33.16■■■□□ 2.9
NOM1-204ENST00000472491 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
NOM1-204ENST00000472491 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
NOM1-204ENST00000472491 NESP48681 1621 aa32.76■■■□□ 2.83
NOM1-204ENST00000472491 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
NOM1-204ENST00000472491 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
NOM1-204ENST00000472491 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
NOM1-204ENST00000472491 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
NOM1-204ENST00000472491 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
NOM1-204ENST00000472491 KIF21AQ7Z4S6 1674 aa32.38■■■□□ 2.77
NOM1-204ENST00000472491 CFTRP13569 1480 aa32.38■■■□□ 2.77
NOM1-204ENST00000472491 SUPT5HO00267 1087 aaKnown RBP32.36■■■□□ 2.77
NOM1-204ENST00000472491 CUX2O14529 1486 aa32.32■■■□□ 2.76
NOM1-204ENST00000472491 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
NOM1-204ENST00000472491 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
NOM1-204ENST00000472491 CEP164Q9UPV0 1460 aa32.2■■■□□ 2.75
NOM1-204ENST00000472491 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
NOM1-204ENST00000472491 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
NOM1-204ENST00000472491 WDR62O43379 1518 aa32.01■■■□□ 2.72
NOM1-204ENST00000472491 URB2Q14146 1524 aaKnown RBP31.88■■■□□ 2.69
NOM1-204ENST00000472491 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
NOM1-204ENST00000472491 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
NOM1-204ENST00000472491 DNMBPQ6XZF7 1577 aa31.67■■■□□ 2.66
NOM1-204ENST00000472491 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
NOM1-204ENST00000472491 CUX1P39880 1505 aa31.44■■■□□ 2.62
NOM1-204ENST00000472491 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
NOM1-204ENST00000472491 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
NOM1-204ENST00000472491 ZNF608Q9ULD9 1512 aaPredicted RBP31.35■■■□□ 2.61
NOM1-204ENST00000472491 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
NOM1-204ENST00000472491 SOGA1O94964 1423 aa31.33■■■□□ 2.61
NOM1-204ENST00000472491 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
NOM1-204ENST00000472491 RAD54L2Q9Y4B4 1467 aa31.29■■■□□ 2.6
NOM1-204ENST00000472491 WRNQ14191 1432 aaPredicted RBP eCLIP31.26■■■□□ 2.6
NOM1-204ENST00000472491 EIF4G3O43432 1585 aaKnown RBP31.24■■■□□ 2.59
NOM1-204ENST00000472491 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.584e-7■■■■■ 28.6
NOM1-204ENST00000472491 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
NOM1-204ENST00000472491 BIVM-ERCC5R4GMW8 1640 aa31.16■■■□□ 2.58
NOM1-204ENST00000472491 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
NOM1-204ENST00000472491 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
NOM1-204ENST00000472491 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
NOM1-204ENST00000472491 ABCA10Q8WWZ4 1543 aa31.04■■■□□ 2.56
NOM1-204ENST00000472491 OSCARQ8IYS5 282 aa31.03■■■□□ 2.56
NOM1-204ENST00000472491 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
NOM1-204ENST00000472491 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
NOM1-204ENST00000472491 FBLN2P98095 1184 aa30.92■■■□□ 2.54
NOM1-204ENST00000472491 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
NOM1-204ENST00000472491 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
NOM1-204ENST00000472491 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
NOM1-204ENST00000472491 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
NOM1-204ENST00000472491 CHD1O14646 1710 aa30.86■■■□□ 2.53
NOM1-204ENST00000472491 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
NOM1-204ENST00000472491 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
NOM1-204ENST00000472491 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
NOM1-204ENST00000472491 KIF27Q86VH2 1401 aa30.63■■■□□ 2.49
NOM1-204ENST00000472491 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
NOM1-204ENST00000472491 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
NOM1-204ENST00000472491 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
NOM1-204ENST00000472491 GRIN2AQ12879 1464 aa30.54■■■□□ 2.48
NOM1-204ENST00000472491 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
NOM1-204ENST00000472491 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
NOM1-204ENST00000472491 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
NOM1-204ENST00000472491 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
NOM1-204ENST00000472491 IGF1RP08069 1367 aa30.47■■■□□ 2.47
NOM1-204ENST00000472491 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
NOM1-204ENST00000472491 CUL7Q14999 1698 aa30.41■■■□□ 2.46
NOM1-204ENST00000472491 NUP160Q12769 1436 aa30.39■■■□□ 2.45
NOM1-204ENST00000472491 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
NOM1-204ENST00000472491 CARMIL1Q5VZK9 1371 aa30.32■■■□□ 2.44
NOM1-204ENST00000472491 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
NOM1-204ENST00000472491 CYB5RLQ6IPT4 315 aa30.25■■■□□ 2.43
NOM1-204ENST00000472491 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
NOM1-204ENST00000472491 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
NOM1-204ENST00000472491 RAPGEF2Q9Y4G8 1499 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms