RNA–Protein interactions for RNA: ENST00000472374.6

CENPM-208, Transcript of centromere protein M, humanhuman

TSL 1 (best) BASIC

Gene CENPM, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPM-208ENST00000472374 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
CENPM-208ENST00000472374 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
CENPM-208ENST00000472374 ABCC9O60706 1549 aa32.16■■■□□ 2.74
CENPM-208ENST00000472374 RB1CC1Q8TDY2 1594 aa31.04■■■□□ 2.56
CENPM-208ENST00000472374 NACADO15069 1562 aa31■■■□□ 2.55
CENPM-208ENST00000472374 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
CENPM-208ENST00000472374 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
CENPM-208ENST00000472374 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
CENPM-208ENST00000472374 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
CENPM-208ENST00000472374 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
CENPM-208ENST00000472374 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
CENPM-208ENST00000472374 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
CENPM-208ENST00000472374 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
CENPM-208ENST00000472374 SCRIBQ14160 1630 aa29.87■■■□□ 2.37
CENPM-208ENST00000472374 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
CENPM-208ENST00000472374 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
CENPM-208ENST00000472374 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
CENPM-208ENST00000472374 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
CENPM-208ENST00000472374 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
CENPM-208ENST00000472374 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
CENPM-208ENST00000472374 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
CENPM-208ENST00000472374 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
CENPM-208ENST00000472374 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
CENPM-208ENST00000472374 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
CENPM-208ENST00000472374 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
CENPM-208ENST00000472374 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
CENPM-208ENST00000472374 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
CENPM-208ENST00000472374 WIZO95785 1651 aa28.03■■■□□ 2.08
CENPM-208ENST00000472374 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
CENPM-208ENST00000472374 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
CENPM-208ENST00000472374 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
CENPM-208ENST00000472374 NESP48681 1621 aa27.79■■■□□ 2.04
CENPM-208ENST00000472374 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
CENPM-208ENST00000472374 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
CENPM-208ENST00000472374 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
CENPM-208ENST00000472374 CUX2O14529 1486 aa27.66■■■□□ 2.02
CENPM-208ENST00000472374 CFTRP13569 1480 aa27.55■■■□□ 2
CENPM-208ENST00000472374 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
CENPM-208ENST00000472374 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
CENPM-208ENST00000472374 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
CENPM-208ENST00000472374 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
CENPM-208ENST00000472374 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
CENPM-208ENST00000472374 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
CENPM-208ENST00000472374 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
CENPM-208ENST00000472374 WDR62O43379 1518 aa27.3■■□□□ 1.96
CENPM-208ENST00000472374 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
CENPM-208ENST00000472374 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
CENPM-208ENST00000472374 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
CENPM-208ENST00000472374 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
CENPM-208ENST00000472374 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
CENPM-208ENST00000472374 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
CENPM-208ENST00000472374 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
CENPM-208ENST00000472374 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
CENPM-208ENST00000472374 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
CENPM-208ENST00000472374 CUX1P39880 1505 aa26.64■■□□□ 1.85
CENPM-208ENST00000472374 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
CENPM-208ENST00000472374 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
CENPM-208ENST00000472374 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
CENPM-208ENST00000472374 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
CENPM-208ENST00000472374 SOGA1O94964 1423 aa26.55■■□□□ 1.84
CENPM-208ENST00000472374 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
CENPM-208ENST00000472374 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
CENPM-208ENST00000472374 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
CENPM-208ENST00000472374 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
CENPM-208ENST00000472374 AQRO60306 1485 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■□□□□ 10.6
CENPM-208ENST00000472374 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
CENPM-208ENST00000472374 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
CENPM-208ENST00000472374 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
CENPM-208ENST00000472374 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
CENPM-208ENST00000472374 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
CENPM-208ENST00000472374 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
CENPM-208ENST00000472374 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
CENPM-208ENST00000472374 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
CENPM-208ENST00000472374 SNAPC4Q5SXM2 1469 aa26.22■■□□□ 1.79
CENPM-208ENST00000472374 CHD1O14646 1710 aa26.21■■□□□ 1.79
CENPM-208ENST00000472374 PBRM1Q86U86 1689 aa26.2■■□□□ 1.78
CENPM-208ENST00000472374 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
CENPM-208ENST00000472374 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
CENPM-208ENST00000472374 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
CENPM-208ENST00000472374 FBLN2P98095 1184 aa26.07■■□□□ 1.76
CENPM-208ENST00000472374 ADAMTS12P58397 1594 aa26■■□□□ 1.75
CENPM-208ENST00000472374 CLASP1Q7Z460 1538 aa25.99■■□□□ 1.75
CENPM-208ENST00000472374 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
CENPM-208ENST00000472374 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
CENPM-208ENST00000472374 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
CENPM-208ENST00000472374 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
CENPM-208ENST00000472374 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
CENPM-208ENST00000472374 GRIN2AQ12879 1464 aa25.95■■□□□ 1.74
CENPM-208ENST00000472374 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
CENPM-208ENST00000472374 NUP160Q12769 1436 aa25.87■■□□□ 1.73
CENPM-208ENST00000472374 CUL7Q14999 1698 aa25.81■■□□□ 1.72
CENPM-208ENST00000472374 IGF1RP08069 1367 aa25.81■■□□□ 1.72
CENPM-208ENST00000472374 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
CENPM-208ENST00000472374 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
CENPM-208ENST00000472374 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
CENPM-208ENST00000472374 SHROOM2Q13796 1616 aa25.7■■□□□ 1.7
CENPM-208ENST00000472374 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
CENPM-208ENST00000472374 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.69
CENPM-208ENST00000472374 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
CENPM-208ENST00000472374 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms