RNA–Protein interactions for RNA: ENST00000472000.1

REV1-208, Transcript of REV1, DNA directed polymerase, humanhuman

TSL 2

Gene REV1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REV1-208ENST00000472000 AEBP2Q6ZN18 517 aaPredicted RBP34.77■■■■□ 3.16
REV1-208ENST00000472000 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
REV1-208ENST00000472000 PHF23Q9BUL5 403 aaPredicted RBP29.74■■■□□ 2.35
REV1-208ENST00000472000 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
REV1-208ENST00000472000 FOXD1Q16676 465 aa27.42■■□□□ 1.98
REV1-208ENST00000472000 PLPPR3Q6T4P5 718 aa27.35■■□□□ 1.97
REV1-208ENST00000472000 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
REV1-208ENST00000472000 ADRA2BP18089 450 aa26.26■■□□□ 1.79
REV1-208ENST00000472000 PIAS4Q8N2W9 510 aaPredicted RBP25.81■■□□□ 1.72
REV1-208ENST00000472000 MSH5O43196 834 aa25.29■■□□□ 1.64
REV1-208ENST00000472000 PPP4R3CPQ6ZMV5 832 aa24.12■■□□□ 1.45
REV1-208ENST00000472000 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
REV1-208ENST00000472000 MAPK8IP2Q13387 824 aaPredicted RBP23.89■■□□□ 1.41
REV1-208ENST00000472000 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
REV1-208ENST00000472000 CNKSR2Q8WXI2 1034 aa23.45■■□□□ 1.34
REV1-208ENST00000472000 KCNA4P22459 653 aa23.41■■□□□ 1.34
REV1-208ENST00000472000 NCBP3Q53F19 620 aaKnown RBP23.4■■□□□ 1.34
REV1-208ENST00000472000 POTEDQ86YR6 584 aa23.33■■□□□ 1.33
REV1-208ENST00000472000 NPM3O75607 178 aaKnown RBP23.1■■□□□ 1.29
REV1-208ENST00000472000 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
REV1-208ENST00000472000 HOXD11P31277 338 aaPredicted RBP22.97■■□□□ 1.27
REV1-208ENST00000472000 DCAF8L1A6NGE4 600 aa22.54■■□□□ 1.2
REV1-208ENST00000472000 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
REV1-208ENST00000472000 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
REV1-208ENST00000472000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.18e-10■■□□□ 14.5
REV1-208ENST00000472000 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
REV1-208ENST00000472000 RNF39Q9H2S5 420 aa21.68■■□□□ 1.06
REV1-208ENST00000472000 FOXD4L1Q9NU39 408 aa21.55■■□□□ 1.04
REV1-208ENST00000472000 ZBTB22O15209 634 aa21.54■■□□□ 1.04
REV1-208ENST00000472000 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
REV1-208ENST00000472000 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
REV1-208ENST00000472000 C1QBPQ07021 282 aaKnown RBP21.39■■□□□ 1.01
REV1-208ENST00000472000 MYCNP04198 464 aaPredicted RBP21.32■■□□□ 1
REV1-208ENST00000472000 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
REV1-208ENST00000472000 CACNB1Q02641 598 aaPredicted RBP21.23■□□□□ 0.99
REV1-208ENST00000472000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
REV1-208ENST00000472000 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
REV1-208ENST00000472000 SAMD1Q6SPF0 538 aaPredicted RBP21.09■□□□□ 0.97
REV1-208ENST00000472000 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
REV1-208ENST00000472000 APLP2Q06481 763 aa20.96■□□□□ 0.95
REV1-208ENST00000472000 CAPN15O75808 1086 aa20.91■□□□□ 0.94
REV1-208ENST00000472000 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
REV1-208ENST00000472000 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
REV1-208ENST00000472000 ATXN8OSP0DMR3 200 aa20.78■□□□□ 0.92
REV1-208ENST00000472000 ZNF219Q9P2Y4 722 aaPredicted RBP20.73■□□□□ 0.91
REV1-208ENST00000472000 DSG3P32926 999 aa20.59■□□□□ 0.89
REV1-208ENST00000472000 ABCB7O75027 752 aa20.52■□□□□ 0.88
REV1-208ENST00000472000 POLA2Q14181 598 aa20.41■□□□□ 0.86
REV1-208ENST00000472000 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
REV1-208ENST00000472000 FBLN2P98095 1184 aa19.89■□□□□ 0.77
REV1-208ENST00000472000 MKRN4PQ13434 485 aaPredicted RBP19.89■□□□□ 0.77
REV1-208ENST00000472000 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
REV1-208ENST00000472000 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.72
REV1-208ENST00000472000 SPDYE2BA6NHP3 402 aa19.47■□□□□ 0.71
REV1-208ENST00000472000 SPDYE6P0CI01 402 aa19.47■□□□□ 0.71
REV1-208ENST00000472000 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
REV1-208ENST00000472000 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
REV1-208ENST00000472000 SPDYE4A6NLX3 237 aa19.35■□□□□ 0.69
REV1-208ENST00000472000 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
REV1-208ENST00000472000 SSUH2Q9Y2M2 353 aa19.32■□□□□ 0.68
REV1-208ENST00000472000 FKBP8Q14318 412 aa19.25■□□□□ 0.67
REV1-208ENST00000472000 REM2Q8IYK8 340 aaPredicted RBP19.17■□□□□ 0.66
REV1-208ENST00000472000 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
REV1-208ENST00000472000 PROM2Q8N271 834 aa19■□□□□ 0.63
REV1-208ENST00000472000 PITPNM1O00562 1244 aa18.95■□□□□ 0.62
REV1-208ENST00000472000 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
REV1-208ENST00000472000 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
REV1-208ENST00000472000 CHRDL2Q6WN34 429 aa18.86■□□□□ 0.61
REV1-208ENST00000472000 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
REV1-208ENST00000472000 PRR29P0C7W0 189 aa18.69■□□□□ 0.58
REV1-208ENST00000472000 FXR2P51116 673 aaKnown RBP eCLIP18.62■□□□□ 0.57
REV1-208ENST00000472000 PIP4P2Q8N4L2 257 aa18.61■□□□□ 0.57
REV1-208ENST00000472000 FBXO3Q9UK99 471 aa18.56■□□□□ 0.56
REV1-208ENST00000472000 PRKAR2AP13861 404 aaKnown RBP18.48■□□□□ 0.55
REV1-208ENST00000472000 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
REV1-208ENST00000472000 POTEHQ6S545 545 aa18.44■□□□□ 0.54
REV1-208ENST00000472000 CREBZFQ9NS37 354 aa18.43■□□□□ 0.54
REV1-208ENST00000472000 MIER1Q8N108 512 aa18.38■□□□□ 0.53
REV1-208ENST00000472000 VASPP50552 380 aaPredicted RBP18.33■□□□□ 0.52
REV1-208ENST00000472000 PLCD3Q8N3E9 789 aa18.32■□□□□ 0.52
REV1-208ENST00000472000 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
REV1-208ENST00000472000 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
REV1-208ENST00000472000 MNX1P50219 401 aaPredicted RBP18.22■□□□□ 0.51
REV1-208ENST00000472000 IFNLR1Q8IU57 520 aaPredicted RBP18.1■□□□□ 0.49
REV1-208ENST00000472000 NPM1P06748 294 aaKnown RBP eCLIP18.09■□□□□ 0.49
REV1-208ENST00000472000 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
REV1-208ENST00000472000 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
REV1-208ENST00000472000 HAX1O00165 279 aa18.04■□□□□ 0.48
REV1-208ENST00000472000 C19orf67A6NJJ6 358 aa17.99■□□□□ 0.47
REV1-208ENST00000472000 CD44P16070 742 aaKnown RBP17.93■□□□□ 0.46
REV1-208ENST00000472000 NUBP1P53384 320 aa17.92■□□□□ 0.46
REV1-208ENST00000472000 EVX2Q03828 476 aa17.92■□□□□ 0.46
REV1-208ENST00000472000 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
REV1-208ENST00000472000 SPOCK2Q92563 424 aa17.88■□□□□ 0.45
REV1-208ENST00000472000 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
REV1-208ENST00000472000 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
REV1-208ENST00000472000 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
REV1-208ENST00000472000 FAM212AQ96EL1 285 aa17.75■□□□□ 0.43
REV1-208ENST00000472000 DCAF8Q5TAQ9 597 aa17.74■□□□□ 0.43
REV1-208ENST00000472000 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms