RNA–Protein interactions for RNA: ENST00000471792.6

UCHL3-203, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 3

Gene UCHL3, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-203ENST00000471792 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
UCHL3-203ENST00000471792 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
UCHL3-203ENST00000471792 ABCC9O60706 1549 aa27.87■■■□□ 2.05
UCHL3-203ENST00000471792 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
UCHL3-203ENST00000471792 NACADO15069 1562 aa26.95■■□□□ 1.9
UCHL3-203ENST00000471792 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
UCHL3-203ENST00000471792 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
UCHL3-203ENST00000471792 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
UCHL3-203ENST00000471792 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
UCHL3-203ENST00000471792 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
UCHL3-203ENST00000471792 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
UCHL3-203ENST00000471792 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
UCHL3-203ENST00000471792 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
UCHL3-203ENST00000471792 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
UCHL3-203ENST00000471792 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
UCHL3-203ENST00000471792 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
UCHL3-203ENST00000471792 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
UCHL3-203ENST00000471792 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
UCHL3-203ENST00000471792 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
UCHL3-203ENST00000471792 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
UCHL3-203ENST00000471792 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
UCHL3-203ENST00000471792 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
UCHL3-203ENST00000471792 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
UCHL3-203ENST00000471792 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
UCHL3-203ENST00000471792 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
UCHL3-203ENST00000471792 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
UCHL3-203ENST00000471792 WIZO95785 1651 aa24.68■■□□□ 1.54
UCHL3-203ENST00000471792 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
UCHL3-203ENST00000471792 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
UCHL3-203ENST00000471792 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
UCHL3-203ENST00000471792 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
UCHL3-203ENST00000471792 NESP48681 1621 aa24.17■■□□□ 1.46
UCHL3-203ENST00000471792 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
UCHL3-203ENST00000471792 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
UCHL3-203ENST00000471792 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
UCHL3-203ENST00000471792 CFTRP13569 1480 aa24.01■■□□□ 1.43
UCHL3-203ENST00000471792 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
UCHL3-203ENST00000471792 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
UCHL3-203ENST00000471792 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
UCHL3-203ENST00000471792 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
UCHL3-203ENST00000471792 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
UCHL3-203ENST00000471792 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
UCHL3-203ENST00000471792 THOC2Q8NI27 1593 aaKnown RBP23.8■■□□□ 1.4
UCHL3-203ENST00000471792 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
UCHL3-203ENST00000471792 CUX2O14529 1486 aa23.73■■□□□ 1.39
UCHL3-203ENST00000471792 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
UCHL3-203ENST00000471792 WDR62O43379 1518 aa23.65■■□□□ 1.38
UCHL3-203ENST00000471792 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
UCHL3-203ENST00000471792 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
UCHL3-203ENST00000471792 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
UCHL3-203ENST00000471792 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
UCHL3-203ENST00000471792 CUX1P39880 1505 aa23.35■■□□□ 1.33
UCHL3-203ENST00000471792 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
UCHL3-203ENST00000471792 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
UCHL3-203ENST00000471792 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
UCHL3-203ENST00000471792 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
UCHL3-203ENST00000471792 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
UCHL3-203ENST00000471792 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
UCHL3-203ENST00000471792 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
UCHL3-203ENST00000471792 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
UCHL3-203ENST00000471792 SOGA1O94964 1423 aa23.2■■□□□ 1.3
UCHL3-203ENST00000471792 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
UCHL3-203ENST00000471792 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
UCHL3-203ENST00000471792 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
UCHL3-203ENST00000471792 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
UCHL3-203ENST00000471792 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.28
UCHL3-203ENST00000471792 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
UCHL3-203ENST00000471792 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
UCHL3-203ENST00000471792 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
UCHL3-203ENST00000471792 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
UCHL3-203ENST00000471792 PBRM1Q86U86 1689 aa22.92■■□□□ 1.26
UCHL3-203ENST00000471792 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
UCHL3-203ENST00000471792 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
UCHL3-203ENST00000471792 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
UCHL3-203ENST00000471792 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
UCHL3-203ENST00000471792 CHD1O14646 1710 aa22.82■■□□□ 1.24
UCHL3-203ENST00000471792 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
UCHL3-203ENST00000471792 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
UCHL3-203ENST00000471792 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
UCHL3-203ENST00000471792 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
UCHL3-203ENST00000471792 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
UCHL3-203ENST00000471792 FBLN2P98095 1184 aa22.73■■□□□ 1.23
UCHL3-203ENST00000471792 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
UCHL3-203ENST00000471792 ADAMTS12P58397 1594 aa22.7■■□□□ 1.22
UCHL3-203ENST00000471792 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
UCHL3-203ENST00000471792 IGF1RP08069 1367 aa22.66■■□□□ 1.22
UCHL3-203ENST00000471792 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
UCHL3-203ENST00000471792 CUL7Q14999 1698 aa22.62■■□□□ 1.21
UCHL3-203ENST00000471792 GRIN2AQ12879 1464 aa22.6■■□□□ 1.21
UCHL3-203ENST00000471792 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
UCHL3-203ENST00000471792 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
UCHL3-203ENST00000471792 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
UCHL3-203ENST00000471792 NUP160Q12769 1436 aa22.5■■□□□ 1.19
UCHL3-203ENST00000471792 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
UCHL3-203ENST00000471792 EEA1Q15075 1411 aa22.45■■□□□ 1.18
UCHL3-203ENST00000471792 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
UCHL3-203ENST00000471792 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
UCHL3-203ENST00000471792 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
UCHL3-203ENST00000471792 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
UCHL3-203ENST00000471792 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms