RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
SUSD3-204ENST00000471462 ABCC9O60706 1549 aa22.28■■□□□ 1.16
SUSD3-204ENST00000471462 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
SUSD3-204ENST00000471462 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
SUSD3-204ENST00000471462 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
SUSD3-204ENST00000471462 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
SUSD3-204ENST00000471462 NACADO15069 1562 aa20.76■□□□□ 0.91
SUSD3-204ENST00000471462 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
SUSD3-204ENST00000471462 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
SUSD3-204ENST00000471462 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
SUSD3-204ENST00000471462 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
SUSD3-204ENST00000471462 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
SUSD3-204ENST00000471462 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
SUSD3-204ENST00000471462 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
SUSD3-204ENST00000471462 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
SUSD3-204ENST00000471462 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
SUSD3-204ENST00000471462 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
SUSD3-204ENST00000471462 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
SUSD3-204ENST00000471462 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
SUSD3-204ENST00000471462 SCRIBQ14160 1630 aa19.86■□□□□ 0.77
SUSD3-204ENST00000471462 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
SUSD3-204ENST00000471462 CUX2O14529 1486 aa19.39■□□□□ 0.69
SUSD3-204ENST00000471462 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
SUSD3-204ENST00000471462 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SUSD3-204ENST00000471462 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
SUSD3-204ENST00000471462 NESP48681 1621 aa19.03■□□□□ 0.64
SUSD3-204ENST00000471462 HMGXB3Q12766 1538 aa19■□□□□ 0.63
SUSD3-204ENST00000471462 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
SUSD3-204ENST00000471462 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
SUSD3-204ENST00000471462 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.62
SUSD3-204ENST00000471462 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
SUSD3-204ENST00000471462 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
SUSD3-204ENST00000471462 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
SUSD3-204ENST00000471462 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
SUSD3-204ENST00000471462 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
SUSD3-204ENST00000471462 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
SUSD3-204ENST00000471462 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
SUSD3-204ENST00000471462 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
SUSD3-204ENST00000471462 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
SUSD3-204ENST00000471462 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.57
SUSD3-204ENST00000471462 WDR62O43379 1518 aa18.56■□□□□ 0.56
SUSD3-204ENST00000471462 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
SUSD3-204ENST00000471462 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
SUSD3-204ENST00000471462 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
SUSD3-204ENST00000471462 WIZO95785 1651 aa18.34■□□□□ 0.53
SUSD3-204ENST00000471462 CFTRP13569 1480 aa18.3■□□□□ 0.52
SUSD3-204ENST00000471462 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
SUSD3-204ENST00000471462 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
SUSD3-204ENST00000471462 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
SUSD3-204ENST00000471462 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
SUSD3-204ENST00000471462 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SUSD3-204ENST00000471462 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
SUSD3-204ENST00000471462 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
SUSD3-204ENST00000471462 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
SUSD3-204ENST00000471462 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
SUSD3-204ENST00000471462 IFT140Q96RY7 1462 aa18.08■□□□□ 0.49
SUSD3-204ENST00000471462 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
SUSD3-204ENST00000471462 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
SUSD3-204ENST00000471462 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
SUSD3-204ENST00000471462 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
SUSD3-204ENST00000471462 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
SUSD3-204ENST00000471462 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
SUSD3-204ENST00000471462 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
SUSD3-204ENST00000471462 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
SUSD3-204ENST00000471462 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
SUSD3-204ENST00000471462 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
SUSD3-204ENST00000471462 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
SUSD3-204ENST00000471462 CHD1O14646 1710 aa17.86■□□□□ 0.45
SUSD3-204ENST00000471462 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
SUSD3-204ENST00000471462 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
SUSD3-204ENST00000471462 FBLN2P98095 1184 aa17.83■□□□□ 0.44
SUSD3-204ENST00000471462 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
SUSD3-204ENST00000471462 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
SUSD3-204ENST00000471462 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
SUSD3-204ENST00000471462 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
SUSD3-204ENST00000471462 SOGA1O94964 1423 aa17.69■□□□□ 0.42
SUSD3-204ENST00000471462 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
SUSD3-204ENST00000471462 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
SUSD3-204ENST00000471462 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
SUSD3-204ENST00000471462 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
SUSD3-204ENST00000471462 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
SUSD3-204ENST00000471462 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
SUSD3-204ENST00000471462 GRIN2BQ13224 1484 aa17.57■□□□□ 0.4
SUSD3-204ENST00000471462 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
SUSD3-204ENST00000471462 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
SUSD3-204ENST00000471462 CUX1P39880 1505 aa17.52■□□□□ 0.39
SUSD3-204ENST00000471462 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
SUSD3-204ENST00000471462 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
SUSD3-204ENST00000471462 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
SUSD3-204ENST00000471462 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
SUSD3-204ENST00000471462 GRIN2AQ12879 1464 aa17.35■□□□□ 0.37
SUSD3-204ENST00000471462 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
SUSD3-204ENST00000471462 NUP160Q12769 1436 aa17.32■□□□□ 0.36
SUSD3-204ENST00000471462 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
SUSD3-204ENST00000471462 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
SUSD3-204ENST00000471462 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
SUSD3-204ENST00000471462 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
SUSD3-204ENST00000471462 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.35
SUSD3-204ENST00000471462 FOXD1Q16676 465 aa17.19■□□□□ 0.34
SUSD3-204ENST00000471462 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms