RNA–Protein interactions for RNA: ENST00000471042.1

LAMA5-207, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-207ENST00000471042 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
LAMA5-207ENST00000471042 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
LAMA5-207ENST00000471042 ABCC9O60706 1549 aa29.83■■■□□ 2.37
LAMA5-207ENST00000471042 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
LAMA5-207ENST00000471042 NACADO15069 1562 aa28.56■■■□□ 2.16
LAMA5-207ENST00000471042 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
LAMA5-207ENST00000471042 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
LAMA5-207ENST00000471042 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
LAMA5-207ENST00000471042 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
LAMA5-207ENST00000471042 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
LAMA5-207ENST00000471042 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
LAMA5-207ENST00000471042 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.037e-16■□□□□ 11.1
LAMA5-207ENST00000471042 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
LAMA5-207ENST00000471042 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
LAMA5-207ENST00000471042 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
LAMA5-207ENST00000471042 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
LAMA5-207ENST00000471042 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
LAMA5-207ENST00000471042 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
LAMA5-207ENST00000471042 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
LAMA5-207ENST00000471042 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
LAMA5-207ENST00000471042 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
LAMA5-207ENST00000471042 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
LAMA5-207ENST00000471042 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
LAMA5-207ENST00000471042 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
LAMA5-207ENST00000471042 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
LAMA5-207ENST00000471042 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
LAMA5-207ENST00000471042 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
LAMA5-207ENST00000471042 WIZO95785 1651 aa25.9■■□□□ 1.74
LAMA5-207ENST00000471042 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
LAMA5-207ENST00000471042 NESP48681 1621 aa25.76■■□□□ 1.71
LAMA5-207ENST00000471042 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
LAMA5-207ENST00000471042 LAMC3Q9Y6N6 1575 aa25.72■■□□□ 1.71
LAMA5-207ENST00000471042 CUX2O14529 1486 aa25.61■■□□□ 1.69
LAMA5-207ENST00000471042 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
LAMA5-207ENST00000471042 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
LAMA5-207ENST00000471042 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
LAMA5-207ENST00000471042 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
LAMA5-207ENST00000471042 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
LAMA5-207ENST00000471042 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
LAMA5-207ENST00000471042 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
LAMA5-207ENST00000471042 CFTRP13569 1480 aa25.32■■□□□ 1.64
LAMA5-207ENST00000471042 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
LAMA5-207ENST00000471042 WDR62O43379 1518 aa25.23■■□□□ 1.63
LAMA5-207ENST00000471042 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
LAMA5-207ENST00000471042 FANCD2Q9BXW9 1451 aa25.22■■□□□ 1.63
LAMA5-207ENST00000471042 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
LAMA5-207ENST00000471042 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
LAMA5-207ENST00000471042 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
LAMA5-207ENST00000471042 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
LAMA5-207ENST00000471042 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
LAMA5-207ENST00000471042 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
LAMA5-207ENST00000471042 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
LAMA5-207ENST00000471042 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
LAMA5-207ENST00000471042 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
LAMA5-207ENST00000471042 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
LAMA5-207ENST00000471042 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
LAMA5-207ENST00000471042 CUX1P39880 1505 aa24.54■■□□□ 1.52
LAMA5-207ENST00000471042 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
LAMA5-207ENST00000471042 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
LAMA5-207ENST00000471042 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
LAMA5-207ENST00000471042 SOGA1O94964 1423 aa24.42■■□□□ 1.5
LAMA5-207ENST00000471042 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.51e-8■■■■□ 21.6
LAMA5-207ENST00000471042 CHD1O14646 1710 aa24.39■■□□□ 1.5
LAMA5-207ENST00000471042 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
LAMA5-207ENST00000471042 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
LAMA5-207ENST00000471042 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
LAMA5-207ENST00000471042 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
LAMA5-207ENST00000471042 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
LAMA5-207ENST00000471042 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
LAMA5-207ENST00000471042 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
LAMA5-207ENST00000471042 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
LAMA5-207ENST00000471042 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
LAMA5-207ENST00000471042 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
LAMA5-207ENST00000471042 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
LAMA5-207ENST00000471042 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
LAMA5-207ENST00000471042 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
LAMA5-207ENST00000471042 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
LAMA5-207ENST00000471042 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
LAMA5-207ENST00000471042 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
LAMA5-207ENST00000471042 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
LAMA5-207ENST00000471042 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
LAMA5-207ENST00000471042 FBLN2P98095 1184 aa24.09■■□□□ 1.45
LAMA5-207ENST00000471042 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
LAMA5-207ENST00000471042 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
LAMA5-207ENST00000471042 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
LAMA5-207ENST00000471042 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
LAMA5-207ENST00000471042 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
LAMA5-207ENST00000471042 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
LAMA5-207ENST00000471042 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
LAMA5-207ENST00000471042 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
LAMA5-207ENST00000471042 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
LAMA5-207ENST00000471042 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
LAMA5-207ENST00000471042 NUP160Q12769 1436 aa23.81■■□□□ 1.4
LAMA5-207ENST00000471042 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
LAMA5-207ENST00000471042 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
LAMA5-207ENST00000471042 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
LAMA5-207ENST00000471042 CUL7Q14999 1698 aa23.75■■□□□ 1.39
LAMA5-207ENST00000471042 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
LAMA5-207ENST00000471042 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
LAMA5-207ENST00000471042 IGF1RP08069 1367 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms