RNA–Protein interactions for RNA: ENST00000470995.1

LAMB1-208, Transcript of laminin subunit beta 1, humanhuman

TSL 3

Gene LAMB1, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-208ENST00000470995 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.04
LAMB1-208ENST00000470995 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
LAMB1-208ENST00000470995 ABCC9O60706 1549 aa13.18□□□□□ -0.3
LAMB1-208ENST00000470995 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
LAMB1-208ENST00000470995 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
LAMB1-208ENST00000470995 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
LAMB1-208ENST00000470995 NACADO15069 1562 aa12.7□□□□□ -0.38
LAMB1-208ENST00000470995 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
LAMB1-208ENST00000470995 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
LAMB1-208ENST00000470995 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
LAMB1-208ENST00000470995 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
LAMB1-208ENST00000470995 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
LAMB1-208ENST00000470995 SCRIBQ14160 1630 aa12.3□□□□□ -0.44
LAMB1-208ENST00000470995 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
LAMB1-208ENST00000470995 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
LAMB1-208ENST00000470995 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
LAMB1-208ENST00000470995 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
LAMB1-208ENST00000470995 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
LAMB1-208ENST00000470995 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
LAMB1-208ENST00000470995 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
LAMB1-208ENST00000470995 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
LAMB1-208ENST00000470995 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
LAMB1-208ENST00000470995 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
LAMB1-208ENST00000470995 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
LAMB1-208ENST00000470995 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
LAMB1-208ENST00000470995 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
LAMB1-208ENST00000470995 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
LAMB1-208ENST00000470995 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
LAMB1-208ENST00000470995 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
LAMB1-208ENST00000470995 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.54
LAMB1-208ENST00000470995 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
LAMB1-208ENST00000470995 WIZO95785 1651 aa11.57□□□□□ -0.56
LAMB1-208ENST00000470995 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
LAMB1-208ENST00000470995 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
LAMB1-208ENST00000470995 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
LAMB1-208ENST00000470995 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
LAMB1-208ENST00000470995 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
LAMB1-208ENST00000470995 NESP48681 1621 aa11.39□□□□□ -0.59
LAMB1-208ENST00000470995 CFTRP13569 1480 aa11.38□□□□□ -0.59
LAMB1-208ENST00000470995 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
LAMB1-208ENST00000470995 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
LAMB1-208ENST00000470995 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
LAMB1-208ENST00000470995 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
LAMB1-208ENST00000470995 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
LAMB1-208ENST00000470995 CUX2O14529 1486 aa11.19□□□□□ -0.62
LAMB1-208ENST00000470995 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
LAMB1-208ENST00000470995 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
LAMB1-208ENST00000470995 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
LAMB1-208ENST00000470995 WDR62O43379 1518 aa11.11□□□□□ -0.63
LAMB1-208ENST00000470995 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
LAMB1-208ENST00000470995 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
LAMB1-208ENST00000470995 PHF23Q9BUL5 403 aaPredicted RBP11.08□□□□□ -0.64
LAMB1-208ENST00000470995 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
LAMB1-208ENST00000470995 SOGA1O94964 1423 aa11.06□□□□□ -0.64
LAMB1-208ENST00000470995 DNMBPQ6XZF7 1577 aa11.05□□□□□ -0.64
LAMB1-208ENST00000470995 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
LAMB1-208ENST00000470995 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
LAMB1-208ENST00000470995 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
LAMB1-208ENST00000470995 CUX1P39880 1505 aa11.02□□□□□ -0.65
LAMB1-208ENST00000470995 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
LAMB1-208ENST00000470995 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
LAMB1-208ENST00000470995 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
LAMB1-208ENST00000470995 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
LAMB1-208ENST00000470995 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.66
LAMB1-208ENST00000470995 FBLN2P98095 1184 aa10.93□□□□□ -0.66
LAMB1-208ENST00000470995 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
LAMB1-208ENST00000470995 ZNF608Q9ULD9 1512 aaPredicted RBP10.93□□□□□ -0.66
LAMB1-208ENST00000470995 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
LAMB1-208ENST00000470995 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
LAMB1-208ENST00000470995 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
LAMB1-208ENST00000470995 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
LAMB1-208ENST00000470995 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
LAMB1-208ENST00000470995 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
LAMB1-208ENST00000470995 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
LAMB1-208ENST00000470995 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
LAMB1-208ENST00000470995 BIVM-ERCC5R4GMW8 1640 aa10.87□□□□□ -0.67
LAMB1-208ENST00000470995 DNAJC5Q9H3Z4 198 aa10.83□□□□□ -0.68
LAMB1-208ENST00000470995 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
LAMB1-208ENST00000470995 IGF1RP08069 1367 aa10.82□□□□□ -0.68
LAMB1-208ENST00000470995 EIF4G3O43432 1585 aaKnown RBP10.81□□□□□ -0.68
LAMB1-208ENST00000470995 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
LAMB1-208ENST00000470995 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
LAMB1-208ENST00000470995 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
LAMB1-208ENST00000470995 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
LAMB1-208ENST00000470995 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
LAMB1-208ENST00000470995 FAM9AQ8IZU1 332 aaPredicted RBP10.77□□□□□ -0.69
LAMB1-208ENST00000470995 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
LAMB1-208ENST00000470995 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
LAMB1-208ENST00000470995 ABCA5Q8WWZ7 1642 aa10.74□□□□□ -0.69
LAMB1-208ENST00000470995 EEA1Q15075 1411 aa10.73□□□□□ -0.69
LAMB1-208ENST00000470995 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
LAMB1-208ENST00000470995 GRIN2AQ12879 1464 aa10.7□□□□□ -0.7
LAMB1-208ENST00000470995 JPH4Q96JJ6 628 aa10.67□□□□□ -0.7
LAMB1-208ENST00000470995 RAPGEF2Q9Y4G8 1499 aa10.67□□□□□ -0.7
LAMB1-208ENST00000470995 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
LAMB1-208ENST00000470995 PBRM1Q86U86 1689 aa10.65□□□□□ -0.7
LAMB1-208ENST00000470995 NUP160Q12769 1436 aa10.65□□□□□ -0.7
LAMB1-208ENST00000470995 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
LAMB1-208ENST00000470995 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
LAMB1-208ENST00000470995 CUL7Q14999 1698 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms