RNA–Protein interactions for RNA: ENST00000470900.1

MANF-202, Transcript of mesencephalic astrocyte derived neurotrophic factor, humanhuman

TSL 2

Gene MANF, Length 1,509 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MANF-202ENST00000470900 NCBP2P52298 156 aaKnown RBP eCLIP23.59■■□□□ 1.372e-34■□□□□ 10.1
MANF-202ENST00000470900 FTOQ9C0B1 505 aaKnown RBP eCLIP28.7■■■□□ 2.198e-33■■■■■ 90.7
MANF-202ENST00000470900 PRPF4O43172 522 aaKnown RBP eCLIP25.59■■□□□ 1.691e-19■■■■■ 60.7
MANF-202ENST00000470900 EIF3HO15372 352 aaKnown RBP eCLIP25.94■■□□□ 1.742e-19■■□□□ 13.9
MANF-202ENST00000470900 TIA1P31483 386 aaKnown RBP eCLIP23.87■■□□□ 1.416e-16■■■■■ 30
MANF-202ENST00000470900 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.8■■□□□ 1.46e-13■■■■□ 25.6
MANF-202ENST00000470900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.19■■■□□ 2.421e-12■■■■■ 32.1
MANF-202ENST00000470900 DDX3XO00571 662 aaKnown RBP eCLIP26.83■■□□□ 1.893e-12■■■■■ 37.9
MANF-202ENST00000470900 TIAL1Q01085 375 aaKnown RBP eCLIP24.77■■□□□ 1.561e-11■■■■■ 53.9
MANF-202ENST00000470900 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.94■■■□□ 2.062e-11■□□□□ 10.5
MANF-202ENST00000470900 PTBP1P26599 531 aaKnown RBP eCLIP22.41■■□□□ 1.188e-11■■■■■ 41.9
MANF-202ENST00000470900 ZRANB2O95218 330 aaKnown RBP eCLIP26.89■■□□□ 1.892e-10■■■■□ 25.7
MANF-202ENST00000470900 SUB1P53999 127 aaKnown RBP eCLIP19.93■□□□□ 0.782e-10■■■■■ 30.2
MANF-202ENST00000470900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.67■■■□□ 2.023e-10■■□□□ 13.5
MANF-202ENST00000470900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.72■■■■□ 3.794e-10■■■■■ 28.3
MANF-202ENST00000470900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38■■■■□ 3.675e-10■■■□□ 17
MANF-202ENST00000470900 SRSF1Q07955 248 aaKnown RBP eCLIP22.62■■□□□ 1.216e-10■■■□□ 15.8
MANF-202ENST00000470900 SF3B1O75533 1304 aaKnown RBP eCLIP27.3■■□□□ 1.966e-10■■■■■ 187.2
MANF-202ENST00000470900 AQRO60306 1485 aaKnown RBP eCLIP43.02■■■■■ 4.482e-9■■■■■ 36.3
MANF-202ENST00000470900 GTF2F1P35269 517 aaKnown RBP eCLIP27.74■■■□□ 2.035e-9■■■□□ 18.1
MANF-202ENST00000470900 DDX6P26196 483 aaKnown RBP eCLIP26.57■■□□□ 1.841e-8■■■□□ 16.1
MANF-202ENST00000470900 RPS3P23396 243 aaKnown RBP eCLIP24.89■■□□□ 1.573e-8■■■■■ 55.6
MANF-202ENST00000470900 YBX3P16989 372 aaKnown RBP eCLIP31.7■■■□□ 2.674e-8■■□□□ 13
MANF-202ENST00000470900 LARP4Q71RC2 724 aaKnown RBP eCLIP24.5■■□□□ 1.514e-8■■■■■ 28.3
MANF-202ENST00000470900 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.78■■□□□ 1.244e-8■□□□□ 9.6
MANF-202ENST00000470900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.1■□□□□ 0.975e-8■■■■■ 27
MANF-202ENST00000470900 ZNF622Q969S3 477 aaKnown RBP eCLIP31.86■■■□□ 2.696e-8■□□□□ 9.1
MANF-202ENST00000470900 TRA2AQ13595 282 aaKnown RBP eCLIP24.43■■□□□ 1.52e-7■□□□□ 11.2
MANF-202ENST00000470900 FXR2P51116 673 aaKnown RBP eCLIP28.48■■■□□ 2.152e-7■□□□□ 8.9
MANF-202ENST00000470900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.72■■■□□ 2.992e-7■■■□□ 18
MANF-202ENST00000470900 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.54■■□□□ 1.522e-7■■■■■ 278.5
MANF-202ENST00000470900 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.84■■■□□ 2.055e-7■■□□□ 14.1
MANF-202ENST00000470900 SF3A3Q12874 501 aaKnown RBP eCLIP25.14■■□□□ 1.627e-7■■■□□ 18.1
MANF-202ENST00000470900 PABPC4Q13310 644 aaKnown RBP eCLIP29.68■■■□□ 2.349e-7■■■■□ 21.1
MANF-202ENST00000470900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.81■■■■□ 3.961e-6■■■■□ 23.9
MANF-202ENST00000470900 G3BP1Q13283 466 aaKnown RBP eCLIP31.39■■■□□ 2.621e-6■■□□□ 12.4
MANF-202ENST00000470900 SND1Q7KZF4 910 aaKnown RBP eCLIP26.42■■□□□ 1.822e-6■■■■■ 31.7
MANF-202ENST00000470900 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.23■■□□□ 1.313e-6■■□□□ 12.3
MANF-202ENST00000470900 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.22■■□□□ 1.956e-6■■■■■ 48.1
Retrieved 39 of 39 RNA–protein pairs in 16.9 ms