RNA–Protein interactions for RNA: ENST00000470096.1

C2orf42-212, Transcript of chromosome 2 open reading frame 42, humanhuman

TSL 4

Gene C2orf42, Length 579 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf42-212ENST00000470096 NCBP2P52298 156 aaKnown RBP eCLIP14.82□□□□□ -0.042e-32■■□□□ 12.4
C2orf42-212ENST00000470096 HNRNPLP14866 589 aaKnown RBP eCLIP17.1■□□□□ 0.336e-24■■■■■ 46.3
C2orf42-212ENST00000470096 EFTUD2Q15029 972 aaKnown RBP eCLIP15.24■□□□□ 0.032e-21■■■□□ 18.1
C2orf42-212ENST00000470096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.99■□□□□ 0.791e-17■■□□□ 12.3
C2orf42-212ENST00000470096 SRSF1Q07955 248 aaKnown RBP eCLIP15.68■□□□□ 0.14e-17■□□□□ 10.1
C2orf42-212ENST00000470096 DDX3XO00571 662 aaKnown RBP eCLIP16.37■□□□□ 0.211e-16■■□□□ 13.7
C2orf42-212ENST00000470096 AGGF1Q8N302 714 aaeCLIP15.4■□□□□ 0.068e-16■■□□□ 11.5
C2orf42-212ENST00000470096 RBM15Q96T37 977 aaKnown RBP eCLIP16.36■□□□□ 0.217e-15■■■□□ 14.8
C2orf42-212ENST00000470096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.26■■□□□ 1.631e-12■■□□□ 11.6
C2orf42-212ENST00000470096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.33■■□□□ 1.171e-12■■■□□ 15.5
C2orf42-212ENST00000470096 HLTFQ14527 1009 aaKnown RBP eCLIP16.27■□□□□ 0.26e-12■□□□□ 8.1
C2orf42-212ENST00000470096 RBM22Q9NW64 420 aaKnown RBP eCLIP16.27■□□□□ 0.21e-10■■■■■ 27.5
C2orf42-212ENST00000470096 QKIQ96PU8 341 aaKnown RBP eCLIP16■□□□□ 0.152e-10■■■■□ 20.9
C2orf42-212ENST00000470096 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.423e-10■■■■■ 103
C2orf42-212ENST00000470096 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.271e-9■■■■□ 24.6
C2orf42-212ENST00000470096 CSTF2P33240 577 aaKnown RBP eCLIP16.21■□□□□ 0.191e-9■□□□□ 9.3
C2orf42-212ENST00000470096 TARDBPQ13148 414 aaKnown RBP eCLIP16.59■□□□□ 0.252e-9■■■□□ 16.7
C2orf42-212ENST00000470096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.23e-9■■■□□ 18.8
C2orf42-212ENST00000470096 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.4■□□□□ 0.066e-9■□□□□ 10.2
C2orf42-212ENST00000470096 ILF3Q12906 894 aaKnown RBP eCLIP16.33■□□□□ 0.29e-9■■■■■ 27.1
C2orf42-212ENST00000470096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.55■■□□□ 1.849e-9■■■■■ 31
C2orf42-212ENST00000470096 MATR3P43243 847 aaKnown RBP eCLIP17.87■□□□□ 0.451e-8■■□□□ 13
C2orf42-212ENST00000470096 U2AF1Q01081 240 aaKnown RBP eCLIP21.78■■□□□ 1.081e-8■■■■■ 34.3
C2orf42-212ENST00000470096 SMNDC1O75940 238 aaKnown RBP eCLIP14.77□□□□□ -0.053e-8■□□□□ 9.1
C2orf42-212ENST00000470096 PPIGQ13427 754 aaKnown RBP eCLIP19.1■□□□□ 0.653e-8■□□□□ 11.3
C2orf42-212ENST00000470096 GTF2F1P35269 517 aaKnown RBP eCLIP18.29■□□□□ 0.524e-8■□□□□ 9
C2orf42-212ENST00000470096 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.045e-8■□□□□ 10.1
C2orf42-212ENST00000470096 KHSRPQ92945 711 aaKnown RBP eCLIP18.27■□□□□ 0.526e-8■■■□□ 16.5
C2orf42-212ENST00000470096 SF3B4Q15427 424 aaKnown RBP eCLIP15.03■□□□□ -08e-8■■■■■ 45.8
C2orf42-212ENST00000470096 PTBP1P26599 531 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■■■□□ 15
C2orf42-212ENST00000470096 U2AF2P26368 475 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■■■■ 81.6
C2orf42-212ENST00000470096 SRSF7Q16629 238 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■□□□ 12.8
C2orf42-212ENST00000470096 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.431e-7■■■■□ 22.3
C2orf42-212ENST00000470096 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.02■□□□□ 0.641e-7■■□□□ 13.3
C2orf42-212ENST00000470096 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.74■□□□□ 0.752e-7■■■□□ 14.9
C2orf42-212ENST00000470096 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.44□□□□□ -0.13e-7■□□□□ 8.1
C2orf42-212ENST00000470096 ZC3H11AO75152 810 aaKnown RBP eCLIP18.2■□□□□ 0.53e-7■■■■■ 45.6
C2orf42-212ENST00000470096 SF3A3Q12874 501 aaKnown RBP eCLIP13.94□□□□□ -0.184e-7■■■□□ 15.6
C2orf42-212ENST00000470096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.25e-7■■■■■ 27.2
C2orf42-212ENST00000470096 TIAL1Q01085 375 aaKnown RBP eCLIP15.35■□□□□ 0.055e-7■■■■□ 21.2
C2orf42-212ENST00000470096 TIA1P31483 386 aaKnown RBP eCLIP14.85□□□□□ -0.036e-7■■■■□ 23.1
C2orf42-212ENST00000470096 GPKOWQ92917 476 aaPredicted RBP eCLIP18.73■□□□□ 0.597e-7■■■□□ 14.6
C2orf42-212ENST00000470096 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.72□□□□□ -0.059e-7■■■■□ 25.1
C2orf42-212ENST00000470096 EIF3HO15372 352 aaKnown RBP eCLIP15.25■□□□□ 0.031e-6■■■■□ 20.8
C2orf42-212ENST00000470096 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■□□□ 13
C2orf42-212ENST00000470096 PCBP2Q15366 365 aaKnown RBP eCLIP15.06■□□□□ 01e-6■□□□□ 10.8
C2orf42-212ENST00000470096 LSM11P83369 360 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 10.3
C2orf42-212ENST00000470096 HNRNPCP07910 306 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 19.7
C2orf42-212ENST00000470096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■□□□□ 8.3
C2orf42-212ENST00000470096 RPS3P23396 243 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■□□□□ 10.1
C2orf42-212ENST00000470096 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.783e-6■□□□□ 9
C2orf42-212ENST00000470096 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.113e-6■■■□□ 17.4
C2orf42-212ENST00000470096 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.474e-6■■■■■ 53.5
C2orf42-212ENST00000470096 HNRNPKP61978 463 aaKnown RBP eCLIP16.59■□□□□ 0.254e-6■□□□□ 8.5
C2orf42-212ENST00000470096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.24■■□□□ 1.635e-6■■■■■ 46.2
C2orf42-212ENST00000470096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.356e-6■■■■■ 48.1
C2orf42-212ENST00000470096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.297e-6■■■□□ 17.5
Retrieved 57 of 57 RNA–protein pairs in 11.6 ms