RNA–Protein interactions for RNA: ENST00000468069.1

RPS6KC1-203, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 3

Gene RPS6KC1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-203ENST00000468069 PTBP1P26599 531 aaKnown RBP eCLIP4.01□□□□□ -1.775e-17■■■■■ 41.8
RPS6KC1-203ENST00000468069 MATR3P43243 847 aaKnown RBP eCLIP6.02□□□□□ -1.452e-11■■■□□ 15.9
RPS6KC1-203ENST00000468069 U2AF2P26368 475 aaKnown RBP eCLIP6.07□□□□□ -1.444e-11■■■■■ 30.4
RPS6KC1-203ENST00000468069 PPIGQ13427 754 aaKnown RBP eCLIP6.72□□□□□ -1.337e-11■■■□□ 16.6
RPS6KC1-203ENST00000468069 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.493e-10■■■■□ 23.6
RPS6KC1-203ENST00000468069 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.73e-10■■■■■ 31
RPS6KC1-203ENST00000468069 QKIQ96PU8 341 aaKnown RBP eCLIP5.25□□□□□ -1.574e-10■■■■■ 32.5
RPS6KC1-203ENST00000468069 SF3B1O75533 1304 aaKnown RBP eCLIP6.17□□□□□ -1.421e-9■■■■■ 47.3
RPS6KC1-203ENST00000468069 KHSRPQ92945 711 aaKnown RBP eCLIP12.4□□□□□ -0.424e-9■■■□□ 14.6
RPS6KC1-203ENST00000468069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.294e-8■■■□□ 16.9
RPS6KC1-203ENST00000468069 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.191e-7■□□□□ 10.3
RPS6KC1-203ENST00000468069 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.62□□□□□ -1.353e-7■■□□□ 13.5
RPS6KC1-203ENST00000468069 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.64□□□□□ -1.675e-7■■■■■ 40.5
RPS6KC1-203ENST00000468069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.416e-7■■□□□ 11.4
RPS6KC1-203ENST00000468069 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.236e-7■□□□□ 8.1
RPS6KC1-203ENST00000468069 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■■■■□ 20.1
RPS6KC1-203ENST00000468069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■■■■■ 96.1
RPS6KC1-203ENST00000468069 TIA1P31483 386 aaKnown RBP eCLIP4.84□□□□□ -1.632e-6■■■■□ 24.7
RPS6KC1-203ENST00000468069 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.05□□□□□ -1.63e-6■■■■□ 21.5
RPS6KC1-203ENST00000468069 SRSF7Q16629 238 aaKnown RBP eCLIP5.4□□□□□ -1.543e-6■■■■□ 20.4
RPS6KC1-203ENST00000468069 XRCC6P12956 609 aaKnown RBP eCLIP6.04□□□□□ -1.445e-6■■□□□ 11.5
RPS6KC1-203ENST00000468069 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.375e-6■■■■□ 24.4
RPS6KC1-203ENST00000468069 HNRNPLP14866 589 aaKnown RBP eCLIP6.08□□□□□ -1.445e-6■□□□□ 8.4
RPS6KC1-203ENST00000468069 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.066e-6■■□□□ 12.4
RPS6KC1-203ENST00000468069 SF3B4Q15427 424 aaKnown RBP eCLIP5.05□□□□□ -1.67e-6■■■□□ 15.4
Retrieved 25 of 25 RNA–protein pairs in 6.6 ms