RNA–Protein interactions for RNA: ENST00000467613.5

UBP1-208, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 659 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-208ENST00000467613 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
UBP1-208ENST00000467613 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
UBP1-208ENST00000467613 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
UBP1-208ENST00000467613 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
UBP1-208ENST00000467613 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
UBP1-208ENST00000467613 FOXD1Q16676 465 aa14.4□□□□□ -0.1
UBP1-208ENST00000467613 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
UBP1-208ENST00000467613 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
UBP1-208ENST00000467613 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
UBP1-208ENST00000467613 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
UBP1-208ENST00000467613 MSH5O43196 834 aa13.42□□□□□ -0.26
UBP1-208ENST00000467613 ADRA2BP18089 450 aa13.41□□□□□ -0.26
UBP1-208ENST00000467613 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
UBP1-208ENST00000467613 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
UBP1-208ENST00000467613 ABCC9O60706 1549 aa12.89□□□□□ -0.35
UBP1-208ENST00000467613 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
UBP1-208ENST00000467613 MYO15BQ96JP2 1530 aa12.82□□□□□ -0.36
UBP1-208ENST00000467613 NACADO15069 1562 aa12.72□□□□□ -0.37
UBP1-208ENST00000467613 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
UBP1-208ENST00000467613 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
UBP1-208ENST00000467613 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
UBP1-208ENST00000467613 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
UBP1-208ENST00000467613 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
UBP1-208ENST00000467613 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
UBP1-208ENST00000467613 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
UBP1-208ENST00000467613 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
UBP1-208ENST00000467613 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
UBP1-208ENST00000467613 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBP1-208ENST00000467613 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
UBP1-208ENST00000467613 BAZ1AQ9NRL2 1556 aaPredicted RBP11.95□□□□□ -0.5
UBP1-208ENST00000467613 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
UBP1-208ENST00000467613 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
UBP1-208ENST00000467613 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
UBP1-208ENST00000467613 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
UBP1-208ENST00000467613 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
UBP1-208ENST00000467613 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
UBP1-208ENST00000467613 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
UBP1-208ENST00000467613 WIZO95785 1651 aa11.8□□□□□ -0.52
UBP1-208ENST00000467613 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
UBP1-208ENST00000467613 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
UBP1-208ENST00000467613 ATAD2BQ9ULI0 1458 aa11.75□□□□□ -0.53
UBP1-208ENST00000467613 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
UBP1-208ENST00000467613 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
UBP1-208ENST00000467613 CACNB1Q02641 598 aaPredicted RBP11.7□□□□□ -0.54
UBP1-208ENST00000467613 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
UBP1-208ENST00000467613 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
UBP1-208ENST00000467613 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
UBP1-208ENST00000467613 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
UBP1-208ENST00000467613 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
UBP1-208ENST00000467613 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
UBP1-208ENST00000467613 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
UBP1-208ENST00000467613 CCDC88BA6NC98 1476 aa11.52□□□□□ -0.56
UBP1-208ENST00000467613 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
UBP1-208ENST00000467613 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
UBP1-208ENST00000467613 CFTRP13569 1480 aa11.38□□□□□ -0.59
UBP1-208ENST00000467613 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
UBP1-208ENST00000467613 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
UBP1-208ENST00000467613 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
UBP1-208ENST00000467613 NESP48681 1621 aa11.28□□□□□ -0.6
UBP1-208ENST00000467613 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
UBP1-208ENST00000467613 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
UBP1-208ENST00000467613 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
UBP1-208ENST00000467613 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
UBP1-208ENST00000467613 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
UBP1-208ENST00000467613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■□□ 16.4
UBP1-208ENST00000467613 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
UBP1-208ENST00000467613 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
UBP1-208ENST00000467613 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
UBP1-208ENST00000467613 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
UBP1-208ENST00000467613 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
UBP1-208ENST00000467613 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
UBP1-208ENST00000467613 CUX1P39880 1505 aa11.14□□□□□ -0.63
UBP1-208ENST00000467613 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
UBP1-208ENST00000467613 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
UBP1-208ENST00000467613 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
UBP1-208ENST00000467613 WDR62O43379 1518 aa11.1□□□□□ -0.63
UBP1-208ENST00000467613 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
UBP1-208ENST00000467613 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
UBP1-208ENST00000467613 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
UBP1-208ENST00000467613 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
UBP1-208ENST00000467613 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
UBP1-208ENST00000467613 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
UBP1-208ENST00000467613 CUX2O14529 1486 aa11.01□□□□□ -0.65
UBP1-208ENST00000467613 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
UBP1-208ENST00000467613 TARBP1Q13395 1621 aaKnown RBP11.01□□□□□ -0.65
UBP1-208ENST00000467613 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
UBP1-208ENST00000467613 KCNA4P22459 653 aa10.96□□□□□ -0.65
UBP1-208ENST00000467613 ABCA5Q8WWZ7 1642 aa10.94□□□□□ -0.66
UBP1-208ENST00000467613 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
UBP1-208ENST00000467613 SOGA1O94964 1423 aa10.93□□□□□ -0.66
UBP1-208ENST00000467613 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
UBP1-208ENST00000467613 EEA1Q15075 1411 aa10.92□□□□□ -0.66
UBP1-208ENST00000467613 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
UBP1-208ENST00000467613 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
UBP1-208ENST00000467613 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
UBP1-208ENST00000467613 PBRM1Q86U86 1689 aa10.89□□□□□ -0.67
UBP1-208ENST00000467613 KIF27Q86VH2 1401 aa10.88□□□□□ -0.67
UBP1-208ENST00000467613 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
UBP1-208ENST00000467613 ERICH3Q5RHP9 1530 aa10.86□□□□□ -0.67
UBP1-208ENST00000467613 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms