RNA–Protein interactions for RNA: ENST00000467567.1

RSF1-203, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-203ENST00000467567 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
RSF1-203ENST00000467567 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
RSF1-203ENST00000467567 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
RSF1-203ENST00000467567 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
RSF1-203ENST00000467567 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
RSF1-203ENST00000467567 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
RSF1-203ENST00000467567 MYO15BQ96JP2 1530 aa24.84■■□□□ 1.57
RSF1-203ENST00000467567 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
RSF1-203ENST00000467567 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
RSF1-203ENST00000467567 HRCP23327 699 aa24.39■■□□□ 1.49
RSF1-203ENST00000467567 LOC105371045A0A1W2PR82 267 aa24.28■■□□□ 1.48
RSF1-203ENST00000467567 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
RSF1-203ENST00000467567 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
RSF1-203ENST00000467567 SCRIBQ14160 1630 aa23.83■■□□□ 1.4
RSF1-203ENST00000467567 ABCC9O60706 1549 aa23.81■■□□□ 1.4
RSF1-203ENST00000467567 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
RSF1-203ENST00000467567 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
RSF1-203ENST00000467567 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
RSF1-203ENST00000467567 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
RSF1-203ENST00000467567 TRIM41Q8WV44 630 aa23.64■■□□□ 1.38
RSF1-203ENST00000467567 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
RSF1-203ENST00000467567 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
RSF1-203ENST00000467567 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
RSF1-203ENST00000467567 WIZO95785 1651 aa23.18■■□□□ 1.3
RSF1-203ENST00000467567 NACADO15069 1562 aa23.12■■□□□ 1.29
RSF1-203ENST00000467567 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
RSF1-203ENST00000467567 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
RSF1-203ENST00000467567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
RSF1-203ENST00000467567 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
RSF1-203ENST00000467567 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
RSF1-203ENST00000467567 EIF4G1Q04637 1599 aaKnown RBP22.81■■□□□ 1.24
RSF1-203ENST00000467567 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
RSF1-203ENST00000467567 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.23
RSF1-203ENST00000467567 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
RSF1-203ENST00000467567 SOGA1O94964 1423 aa22.67■■□□□ 1.22
RSF1-203ENST00000467567 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
RSF1-203ENST00000467567 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
RSF1-203ENST00000467567 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
RSF1-203ENST00000467567 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
RSF1-203ENST00000467567 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
RSF1-203ENST00000467567 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
RSF1-203ENST00000467567 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
RSF1-203ENST00000467567 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
RSF1-203ENST00000467567 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
RSF1-203ENST00000467567 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
RSF1-203ENST00000467567 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
RSF1-203ENST00000467567 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
RSF1-203ENST00000467567 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
RSF1-203ENST00000467567 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
RSF1-203ENST00000467567 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
RSF1-203ENST00000467567 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
RSF1-203ENST00000467567 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
RSF1-203ENST00000467567 EEA1Q15075 1411 aa22.25■■□□□ 1.15
RSF1-203ENST00000467567 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
RSF1-203ENST00000467567 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
RSF1-203ENST00000467567 GTF3C3Q9Y5Q9 886 aa22.18■■□□□ 1.14
RSF1-203ENST00000467567 CLIP1P30622 1438 aa22.11■■□□□ 1.13
RSF1-203ENST00000467567 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
RSF1-203ENST00000467567 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
RSF1-203ENST00000467567 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
RSF1-203ENST00000467567 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
RSF1-203ENST00000467567 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.12
RSF1-203ENST00000467567 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
RSF1-203ENST00000467567 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
RSF1-203ENST00000467567 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
RSF1-203ENST00000467567 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
RSF1-203ENST00000467567 KIF21BO75037 1637 aa21.99■■□□□ 1.11
RSF1-203ENST00000467567 APLP2Q06481 763 aa21.99■■□□□ 1.11
RSF1-203ENST00000467567 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
RSF1-203ENST00000467567 MIER1Q8N108 512 aa21.96■■□□□ 1.11
RSF1-203ENST00000467567 KANK4Q5T7N3 995 aaPredicted RBP21.81■■□□□ 1.08
RSF1-203ENST00000467567 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
RSF1-203ENST00000467567 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
RSF1-203ENST00000467567 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
RSF1-203ENST00000467567 ITGAEP38570 1179 aa21.66■■□□□ 1.06
RSF1-203ENST00000467567 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
RSF1-203ENST00000467567 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
RSF1-203ENST00000467567 CUX1P39880 1505 aa21.63■■□□□ 1.05
RSF1-203ENST00000467567 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
RSF1-203ENST00000467567 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
RSF1-203ENST00000467567 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
RSF1-203ENST00000467567 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
RSF1-203ENST00000467567 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
RSF1-203ENST00000467567 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
RSF1-203ENST00000467567 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
RSF1-203ENST00000467567 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
RSF1-203ENST00000467567 CFTRP13569 1480 aa21.42■■□□□ 1.02
RSF1-203ENST00000467567 CUX2O14529 1486 aa21.39■■□□□ 1.01
RSF1-203ENST00000467567 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
RSF1-203ENST00000467567 IGF1RP08069 1367 aa21.36■■□□□ 1.01
RSF1-203ENST00000467567 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
RSF1-203ENST00000467567 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
RSF1-203ENST00000467567 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
RSF1-203ENST00000467567 FAM50AQ14320 339 aaKnown RBP21.3■■□□□ 1
RSF1-203ENST00000467567 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
RSF1-203ENST00000467567 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
RSF1-203ENST00000467567 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
RSF1-203ENST00000467567 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
RSF1-203ENST00000467567 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
RSF1-203ENST00000467567 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms