RNA–Protein interactions for RNA: ENST00000467404.6

CAMTA1-205, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 3 BASIC

Gene CAMTA1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-205ENST00000467404 DDX3XO00571 662 aaKnown RBP eCLIP10.37□□□□□ -0.754e-17■■□□□ 14.4
CAMTA1-205ENST00000467404 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.29□□□□□ -1.248e-10■■■■■ 36.9
CAMTA1-205ENST00000467404 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.771e-9■■□□□ 12.8
CAMTA1-205ENST00000467404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.78□□□□□ -1.483e-9■■■■■ 80.2
CAMTA1-205ENST00000467404 AARSP49588 968 aaKnown RBP eCLIP8.64□□□□□ -1.037e-9■■■■■ 34.3
CAMTA1-205ENST00000467404 AGGF1Q8N302 714 aaeCLIP13.06□□□□□ -0.323e-8■□□□□ 9.6
CAMTA1-205ENST00000467404 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.774e-8■□□□□ 11.2
CAMTA1-205ENST00000467404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.698e-8■■■□□ 15.2
CAMTA1-205ENST00000467404 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.771e-7■■■□□ 16.1
CAMTA1-205ENST00000467404 TIA1P31483 386 aaKnown RBP eCLIP6.8□□□□□ -1.322e-7■■■□□ 16.1
CAMTA1-205ENST00000467404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■■■ 125
CAMTA1-205ENST00000467404 EFTUD2Q15029 972 aaKnown RBP eCLIP7.01□□□□□ -1.293e-7■■■■■ 40.1
CAMTA1-205ENST00000467404 NCBP2P52298 156 aaKnown RBP eCLIP6.62□□□□□ -1.354e-7■■□□□ 12.7
CAMTA1-205ENST00000467404 FTOQ9C0B1 505 aaKnown RBP eCLIP9.87□□□□□ -0.836e-7■□□□□ 9.2
CAMTA1-205ENST00000467404 LSM11P83369 360 aaKnown RBP eCLIP18.58■□□□□ 0.566e-7■■■□□ 14.6
CAMTA1-205ENST00000467404 SRSF1Q07955 248 aaKnown RBP eCLIP9.2□□□□□ -0.948e-7■■□□□ 12.2
CAMTA1-205ENST00000467404 TARDBPQ13148 414 aaKnown RBP eCLIP8.78□□□□□ -19e-7■■■■□ 19.7
CAMTA1-205ENST00000467404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.86□□□□□ -1.319e-7■■□□□ 14.1
CAMTA1-205ENST00000467404 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.229e-7■■■■□ 24.1
CAMTA1-205ENST00000467404 HNRNPLP14866 589 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■■■■□ 21
CAMTA1-205ENST00000467404 MATR3P43243 847 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■■■□ 22.1
CAMTA1-205ENST00000467404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■□□□ 13.9
CAMTA1-205ENST00000467404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■□ 20.8
CAMTA1-205ENST00000467404 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.53□□□□□ -1.22e-6■■■■■ 54.9
CAMTA1-205ENST00000467404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■□□□□ 10.3
CAMTA1-205ENST00000467404 ZRANB2O95218 330 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■■■□□ 16.1
CAMTA1-205ENST00000467404 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■■■ 34
CAMTA1-205ENST00000467404 EIF4G2P78344 907 aaKnown RBP eCLIP14.87□□□□□ -0.034e-6■■■■■ 27.1
CAMTA1-205ENST00000467404 QKIQ96PU8 341 aaKnown RBP eCLIP7.12□□□□□ -1.276e-6■■■□□ 16
Retrieved 29 of 29 RNA–protein pairs in 6.9 ms