RNA–Protein interactions for RNA: ENST00000467242.1

LBH-208, Transcript of limb bud and heart development, humanhuman

TSL 2

Gene LBH, Length 1,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBH-208ENST00000467242 NISCHQ9Y2I1 1504 aa54.41■■■■■ 6.3
LBH-208ENST00000467242 CCDC180Q9P1Z9 1646 aa47.91■■■■■ 5.26
LBH-208ENST00000467242 ABCC9O60706 1549 aa46.44■■■■■ 5.02
LBH-208ENST00000467242 DCAF8L2P0C7V8 631 aa45.47■■■■■ 4.87
LBH-208ENST00000467242 ZCCHC6Q5VYS8 1495 aaKnown RBP45.45■■■■■ 4.87
LBH-208ENST00000467242 DCAF1Q9Y4B6 1507 aa44.98■■■■■ 4.79
LBH-208ENST00000467242 NACADO15069 1562 aa44.97■■■■■ 4.79
LBH-208ENST00000467242 MYO15BQ96JP2 1530 aa44.89■■■■■ 4.78
LBH-208ENST00000467242 RB1CC1Q8TDY2 1594 aa44.86■■■■■ 4.77
LBH-208ENST00000467242 SCRIBQ14160 1630 aa43.93■■■■■ 4.62
LBH-208ENST00000467242 UNC13AQ9UPW8 1703 aa43.72■■■■■ 4.59
LBH-208ENST00000467242 SHROOM4Q9ULL8 1493 aa43.62■■■■■ 4.57
LBH-208ENST00000467242 PABPN1Q86U42 306 aaKnown RBP eCLIP43.62■■■■■ 4.57
LBH-208ENST00000467242 BICRAQ9NZM4 1560 aa43.45■■■■■ 4.55
LBH-208ENST00000467242 CECR2Q9BXF3 1484 aa42.37■■■■■ 4.37
LBH-208ENST00000467242 EIF4G1Q04637 1599 aaKnown RBP42.28■■■■■ 4.36
LBH-208ENST00000467242 BAZ1AQ9NRL2 1556 aaPredicted RBP42.11■■■■■ 4.33
LBH-208ENST00000467242 DNAJC5BQ9UF47 199 aa42.03■■■■■ 4.32
LBH-208ENST00000467242 SMARCA4P51532 1647 aa42.03■■■■■ 4.32
LBH-208ENST00000467242 MROH2BQ7Z745 1585 aa41.98■■■■■ 4.31
LBH-208ENST00000467242 CC2D2AQ9P2K1 1620 aa41.94■■■■■ 4.31
LBH-208ENST00000467242 RSF1Q96T23 1441 aaPredicted RBP41.79■■■■■ 4.28
LBH-208ENST00000467242 ATAD2BQ9ULI0 1458 aa41.69■■■■■ 4.26
LBH-208ENST00000467242 SMARCA2P51531 1590 aa41.63■■■■■ 4.25
LBH-208ENST00000467242 PEG3Q9GZU2 1588 aa41.56■■■■■ 4.24
LBH-208ENST00000467242 NCAPD3P42695 1498 aa41.54■■■■■ 4.24
LBH-208ENST00000467242 WIZO95785 1651 aa41.52■■■■■ 4.24
LBH-208ENST00000467242 SUPT5HO00267 1087 aaKnown RBP41.46■■■■■ 4.23
LBH-208ENST00000467242 BAZ1BQ9UIG0 1483 aaKnown RBP41.4■■■■■ 4.22
LBH-208ENST00000467242 HMGXB3Q12766 1538 aa41.33■■■■■ 4.21
LBH-208ENST00000467242 TOP2AP11388 1531 aaKnown RBP41.11■■■■■ 4.17
LBH-208ENST00000467242 CCDC88BA6NC98 1476 aa40.71■■■■■ 4.11
LBH-208ENST00000467242 CADPSQ9ULU8 1353 aa40.43■■■■■ 4.06
LBH-208ENST00000467242 NESP48681 1621 aa40.37■■■■■ 4.05
LBH-208ENST00000467242 CFTRP13569 1480 aa40.29■■■■■ 4.04
LBH-208ENST00000467242 LAMC3Q9Y6N6 1575 aa40.28■■■■■ 4.04
LBH-208ENST00000467242 PDS5BQ9NTI5 1447 aa40.09■■■■■ 4.01
LBH-208ENST00000467242 ERCC6Q03468 1493 aa39.98■■■■□ 3.99
LBH-208ENST00000467242 FANCD2Q9BXW9 1451 aa39.95■■■■□ 3.99
LBH-208ENST00000467242 PRDM2Q13029 1718 aa39.83■■■■□ 3.97
LBH-208ENST00000467242 CEP164Q9UPV0 1460 aa39.81■■■■□ 3.96
LBH-208ENST00000467242 KIF21AQ7Z4S6 1674 aa39.78■■■■□ 3.96
LBH-208ENST00000467242 MRC2Q9UBG0 1479 aa39.59■■■■□ 3.93
LBH-208ENST00000467242 THOC2Q8NI27 1593 aaKnown RBP39.47■■■■□ 3.91
LBH-208ENST00000467242 URB2Q14146 1524 aaKnown RBP39.47■■■■□ 3.91
LBH-208ENST00000467242 ABCC8Q09428 1581 aa39.42■■■■□ 3.9
LBH-208ENST00000467242 WRNQ14191 1432 aaPredicted RBP eCLIP39.39■■■■□ 3.9
LBH-208ENST00000467242 WDR62O43379 1518 aa39.38■■■■□ 3.89
LBH-208ENST00000467242 TOPBP1Q92547 1522 aa39.36■■■■□ 3.89
LBH-208ENST00000467242 DNMBPQ6XZF7 1577 aa39.33■■■■□ 3.89
LBH-208ENST00000467242 CUX1P39880 1505 aa39.32■■■■□ 3.89
LBH-208ENST00000467242 CUX2O14529 1486 aa39.19■■■■□ 3.86
LBH-208ENST00000467242 SYNJ1O43426 1573 aa39.18■■■■□ 3.86
LBH-208ENST00000467242 TOP2BQ02880 1626 aa39.13■■■■□ 3.85
LBH-208ENST00000467242 FGD5Q6ZNL6 1462 aa39.1■■■■□ 3.85
LBH-208ENST00000467242 TRIM41Q8WV44 630 aa39.09■■■■□ 3.85
LBH-208ENST00000467242 POLA1P09884 1462 aaPredicted RBP39.08■■■■□ 3.85
LBH-208ENST00000467242 BIVM-ERCC5R4GMW8 1640 aa39.07■■■■□ 3.84
LBH-208ENST00000467242 CHIC1Q5VXU3 224 aa39.03■■■■□ 3.84
LBH-208ENST00000467242 SOGA1O94964 1423 aa39■■■■□ 3.83
LBH-208ENST00000467242 RAD54L2Q9Y4B4 1467 aa38.95■■■■□ 3.83
LBH-208ENST00000467242 IFT140Q96RY7 1462 aa38.94■■■■□ 3.82
LBH-208ENST00000467242 TARBP1Q13395 1621 aaKnown RBP38.81■■■■□ 3.8
LBH-208ENST00000467242 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
LBH-208ENST00000467242 ZNF608Q9ULD9 1512 aaPredicted RBP38.73■■■■□ 3.79
LBH-208ENST00000467242 TDRD9Q8NDG6 1382 aaKnown RBP38.73■■■■□ 3.79
LBH-208ENST00000467242 AQRO60306 1485 aaKnown RBP eCLIP38.66■■■■□ 3.78
LBH-208ENST00000467242 WDR97A6NE52 1622 aa38.58■■■■□ 3.77
LBH-208ENST00000467242 EIF4G3O43432 1585 aaKnown RBP38.53■■■■□ 3.76
LBH-208ENST00000467242 GAPVD1Q14C86 1478 aa38.52■■■■□ 3.76
LBH-208ENST00000467242 KIF27Q86VH2 1401 aa38.52■■■■□ 3.76
LBH-208ENST00000467242 ABCA5Q8WWZ7 1642 aa38.44■■■■□ 3.74
LBH-208ENST00000467242 GRIN2BQ13224 1484 aa38.41■■■■□ 3.74
LBH-208ENST00000467242 RUSC2Q8N2Y8 1516 aa38.4■■■■□ 3.74
LBH-208ENST00000467242 FAM9AQ8IZU1 332 aaPredicted RBP38.32■■■■□ 3.72
LBH-208ENST00000467242 IGF1RP08069 1367 aa38.3■■■■□ 3.72
LBH-208ENST00000467242 SNAPC4Q5SXM2 1469 aa38.26■■■■□ 3.72
LBH-208ENST00000467242 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
LBH-208ENST00000467242 PBRM1Q86U86 1689 aa38.24■■■■□ 3.71
LBH-208ENST00000467242 EEA1Q15075 1411 aa38.21■■■■□ 3.71
LBH-208ENST00000467242 MAGI1Q96QZ7 1491 aaPredicted RBP38.2■■■■□ 3.71
LBH-208ENST00000467242 FBLN2P98095 1184 aa38.18■■■■□ 3.7
LBH-208ENST00000467242 CSRNP3Q8WYN3 585 aa38.18■■■■□ 3.7
LBH-208ENST00000467242 CHMP7Q8WUX9 453 aaPredicted RBP38.13■■■■□ 3.69
LBH-208ENST00000467242 FHAD1B1AJZ9 1412 aa38.1■■■■□ 3.69
LBH-208ENST00000467242 CARMIL1Q5VZK9 1371 aa38.09■■■■□ 3.69
LBH-208ENST00000467242 SYNJ2O15056 1496 aa38.06■■■■□ 3.68
LBH-208ENST00000467242 ADAMTS12P58397 1594 aa38.04■■■■□ 3.68
LBH-208ENST00000467242 CUL7Q14999 1698 aa38■■■■□ 3.67
LBH-208ENST00000467242 PRXQ9BXM0 1461 aa37.92■■■■□ 3.66
LBH-208ENST00000467242 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
LBH-208ENST00000467242 RAPGEF2Q9Y4G8 1499 aa37.9■■■■□ 3.66
LBH-208ENST00000467242 OSCARQ8IYS5 282 aa37.86■■■■□ 3.65
LBH-208ENST00000467242 CHD1O14646 1710 aa37.86■■■■□ 3.65
LBH-208ENST00000467242 EHMT2Q96KQ7 1210 aa37.82■■■■□ 3.65
LBH-208ENST00000467242 KIF21BO75037 1637 aa37.69■■■■□ 3.62
LBH-208ENST00000467242 NUP160Q12769 1436 aa37.69■■■■□ 3.62
LBH-208ENST00000467242 CEP170Q5SW79 1584 aa37.65■■■■□ 3.62
LBH-208ENST00000467242 UBTFP17480 764 aaKnown RBP37.63■■■■□ 3.61
LBH-208ENST00000467242 GOLGA3Q08378 1498 aa37.62■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms