RNA–Protein interactions for RNA: ENST00000466638.5

PNCK-222, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 2

Gene PNCK, Length 1,204 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-222ENST00000466638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.46■□□□□ 0.552e-15■■■■■ 35.7
PNCK-222ENST00000466638 EFTUD2Q15029 972 aaKnown RBP eCLIP15.88■□□□□ 0.134e-15■■□□□ 14.2
PNCK-222ENST00000466638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.27e-14■■□□□ 12.5
PNCK-222ENST00000466638 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.64■□□□□ 0.573e-13■■■□□ 16.3
PNCK-222ENST00000466638 DKC1O60832 514 aaKnown RBP eCLIP18.52■□□□□ 0.562e-12■■■■□ 21.5
PNCK-222ENST00000466638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.25■■□□□ 1.152e-11■■□□□ 13
PNCK-222ENST00000466638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.16■□□□□ 0.342e-11■■■■□ 20.8
PNCK-222ENST00000466638 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.467e-11■■■■■ 47.4
PNCK-222ENST00000466638 HNRNPMP52272 730 aaKnown RBP eCLIP25.84■■□□□ 1.731e-10■■■■□ 19.4
PNCK-222ENST00000466638 TIA1P31483 386 aaKnown RBP eCLIP15.37■□□□□ 0.057e-10■□□□□ 10.3
PNCK-222ENST00000466638 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.641e-9■□□□□ 8.2
PNCK-222ENST00000466638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.334e-9■■□□□ 13.4
PNCK-222ENST00000466638 SF3A3Q12874 501 aaKnown RBP eCLIP14.94□□□□□ -0.026e-9■■■■■ 59.3
PNCK-222ENST00000466638 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.291e-8■■■■□ 25.1
PNCK-222ENST00000466638 PRPF4O43172 522 aaKnown RBP eCLIP15.69■□□□□ 0.11e-8■■■■□ 24.8
PNCK-222ENST00000466638 RBFOX2O43251 390 aaKnown RBP eCLIP12.87□□□□□ -0.353e-8■■■■□ 20.6
PNCK-222ENST00000466638 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.194e-8■■■■■ 27.4
PNCK-222ENST00000466638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.645e-8■■■■■ 55.7
PNCK-222ENST00000466638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.611e-7■■■■□ 22.1
PNCK-222ENST00000466638 SRSF1Q07955 248 aaKnown RBP eCLIP15.18■□□□□ 0.021e-7■■■■□ 21.1
PNCK-222ENST00000466638 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.132e-7■■■■□ 25.8
PNCK-222ENST00000466638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.33■□□□□ 0.042e-7■■□□□ 12.3
PNCK-222ENST00000466638 PPIGQ13427 754 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■■■ 27.1
PNCK-222ENST00000466638 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.36■□□□□ 0.374e-7■□□□□ 10.6
PNCK-222ENST00000466638 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.01■□□□□ 0.794e-7■■■□□ 18.1
PNCK-222ENST00000466638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.4■□□□□ 0.065e-7■■■□□ 18.7
PNCK-222ENST00000466638 SF3B4Q15427 424 aaKnown RBP eCLIP14.95□□□□□ -0.026e-7■■■■■ 43.4
PNCK-222ENST00000466638 PCBP1Q15365 356 aaKnown RBP eCLIP18.28■□□□□ 0.526e-7■□□□□ 11.3
PNCK-222ENST00000466638 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.549e-7■□□□□ 10.3
PNCK-222ENST00000466638 TARDBPQ13148 414 aaKnown RBP eCLIP16.28■□□□□ 0.29e-7■■■■■ 32.3
PNCK-222ENST00000466638 DDX42Q86XP3 938 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■□□□ 12.3
PNCK-222ENST00000466638 ZNF622Q969S3 477 aaKnown RBP eCLIP21.21■□□□□ 0.992e-6■□□□□ 9.4
PNCK-222ENST00000466638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.66■□□□□ 0.422e-6■■■■■ 34.8
PNCK-222ENST00000466638 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■■■ 29.5
PNCK-222ENST00000466638 DDX3XO00571 662 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■■■■□ 24
PNCK-222ENST00000466638 PABPN1Q86U42 306 aaKnown RBP eCLIP32.61■■■□□ 2.813e-6■■■■□ 22.6
PNCK-222ENST00000466638 NIPBLQ6KC79 2804 aaeCLIP13.82□□□□□ -0.25e-6■■■■□ 22.3
PNCK-222ENST00000466638 GTF2F1P35269 517 aaKnown RBP eCLIP18.04■□□□□ 0.485e-6■■■■□ 22
PNCK-222ENST00000466638 NCBP2P52298 156 aaKnown RBP eCLIP15.25■□□□□ 0.036e-6■■■■■ 27.5
PNCK-222ENST00000466638 AATFQ9NY61 560 aaKnown RBP eCLIP20.08■□□□□ 0.816e-6■■□□□ 13
PNCK-222ENST00000466638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.27■□□□□ 0.687e-6■□□□□ 10.8
PNCK-222ENST00000466638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.67■□□□□ 0.18e-6■■■■■ 46.4
Retrieved 42 of 42 RNA–protein pairs in 9.4 ms